Phaeoacremonium minimum: UCRPA7_5994
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Entry
UCRPA7_5994 CDS
T03102
Name
(RefSeq) putative atp-dependent rna helicase dhh1 protein
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRPA7_5994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_5994
03036 Chromosome and associated proteins [BR:
tmn03036
]
UCRPA7_5994
Enzymes [BR:
tmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UCRPA7_5994
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
UCRPA7_5994
mRNA degradation factors
5'-3' decay
Decapping complex
UCRPA7_5994
Chromosome and associated proteins [BR:
tmn03036
]
Eukaryotic type
Gene silencing
piRNA pathway
UCRPA7_5994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NA-iREase2
CMS1
Motif
Other DBs
NCBI-GeneID:
19326604
NCBI-ProteinID:
XP_007916727
UniProt:
R8BGP1
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MADSLVDQLKASSLSGGGSDEWKKTLNIPAKDSRQQTEDVTNTKGMEFEEFGLKRDLLMG
IFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPALEKINPKVSKIQCLIL
VPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAG
KNVADLSECPMFIMDEADKLLSIEFTPVIEQLLKFHPKDRQVMLFSATFPLSVKDFSDKN
MVSPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVELLA
KKITELGYSCFYSHAKMAQQARNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDF
PKNAETYLHRIGRSGRYGHLGLAINLINWDDRFNLYNIERDLGTEIQPIPQTIDKSLYVY
ENPETIPRPISNLNRGANASPAAQLPGLPQGQASSSQPRQPPNDWQGQNGRQNGQRQYQG
GRGQGGSRGGQGRGRGGGYQGQRQNYNGQRGGRGQGQPAPQV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcttagtagatcagttgaaggcttcaagcctgagtggcggtggctcagat
gagtggaagaagacgctgaacatcccagcaaaggatagcagacaacaaaccgaggatgtc
acaaatacaaagggcatggagtttgaagagtttggtctcaagagagatctactaatgggc
attttcgaagccggtttcgagaagccatcaccaattcaggaagaaagcatccccgtcgcg
cttaccggccgagacattctcgcacgagccaagaacggcaccggcaagacagccgccttt
gtcatccccgccctcgagaaaatcaaccctaaagtctcaaagatacaatgtcttatcctc
gtgcctacccgagagctcgcaatgcaaacatcccaggtctgcaagaccttgggcaagcac
cttggaataaacgtcatggtcacaaccggtggcactggcctgcgggacgacattgtgcgt
cttcaagaccctgttcatatcgttgttggcactcctggtcgtatcttggatctggctgga
aagaatgtagccgacctgagcgaatgtcccatgttcatcatggatgaggctgacaagctt
ctctccatcgaattcacccctgtcatcgagcaactcctgaagttccaccccaaggatcgc
caagtcatgctcttttccgccactttccccctctcggtcaaggacttttctgataagaat
atggtcagtccgtacgagatcaacctaatggacgaactaactctccggggaatcacccaa
tactacgcctttgtcgaggagaagcagaaggttcactgcttgaatacattgttctccaag
ctccagatcaaccagtccatcatcttctgcaattcgacaaaccgtgtcgagctccttgca
aagaagatcaccgagcttggctactcatgtttctacagccacgcaaagatggcccaacaa
gcacgtaaccgtgtgttccacgacttccgaaacggtgtctgcagaaaccttgtctgctcc
gatcttctgactcgtggtattgacattcaggctgtcaacgttgtcatcaactttgatttc
cccaagaacgccgagacatacctgcatcgtattggtcgatctggtcggtacggtcatctc
ggtctggctattaacctgatcaactgggatgatcgtttcaacctttacaacattgaacga
gacctcggcactgaaatccagcctatccctcagaccattgacaagagtctctatgtctac
gagaacccggagacgatcccccgtccgatatcgaacctgaaccggggcgctaatgcctcc
cctgccgcacagctccccgggcttccacaagggcaagcatcttcatctcagcctcggcaa
ccaccaaatgactggcaaggccagaatggccgccagaacggtcaacgacagtaccaaggc
ggccgtggacaaggcggctcacgtggtggtcaaggtcgaggtcgtggtggcggctaccaa
ggccaacgtcagaactacaacggccagcgtggcggtcgtggtcaaggccagcctgcgccg
caggtataa
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