Phaeoacremonium minimum: UCRPA7_6601
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Entry
UCRPA7_6601 CDS
T03102
Name
(RefSeq) putative rna binding domain-containing protein
KO
K12881
THO complex subunit 4
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03013
Nucleocytoplasmic transport
tmn03015
mRNA surveillance pathway
tmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRPA7_6601
09122 Translation
03013 Nucleocytoplasmic transport
UCRPA7_6601
03015 mRNA surveillance pathway
UCRPA7_6601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_6601
03041 Spliceosome [BR:
tmn03041
]
UCRPA7_6601
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
UCRPA7_6601
TREX complex
UCRPA7_6601
Spliceosome [BR:
tmn03041
]
Complex C
Other components
EJC/TREX
UCRPA7_6601
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
UCRPA7_6601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
19327275
NCBI-ProteinID:
XP_007917329
UniProt:
R8BF66
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MDRSLDEILAERKSKDGPRGGRGGGQRRRERDRQQEYPRDGVRKLLADPDNRVEAENRQS
RKGTKVRVDNLHWELTKEDLDDLFTRIGPVIKLDIRYDRAGRSEGTAFVTYESHQDASKA
VREFDGANANGQPIKLAIVPSGPGPRRNPFDTAIMPGRPLAERITVPGGRSRSLSPGRDR
DGAARKGIDRYVPGGNGSRSRSPLPNRRREGGRRPGARREGRGARRDEGERKGREGRTKK
TQEELDAEMDDYFGGGEPAHSVAPSNGNGQATEATGDDIDMIE
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcagtctcgacgagattcttgctgagcgcaagagcaaagatggccctcgcggt
ggtcgaggcggcggccagaggcgacgtgagcgcgacagacagcaggaatatccccgcgat
ggcgtcagaaagcttctcgcagatcccgacaaccgcgtcgaggccgagaatcgccagagc
cgcaagggcaccaaagttcgagttgacaacctgcattgggagctcactaaggaggatctc
gatgacctcttcacccgaattggaccagtgatcaagctcgacattcgttacgaccgtgct
ggtcgctctgagggcaccgcattcgtcacatacgagtcgcatcaggatgcgtcaaaggcg
gtccgagaattcgatggggccaatgctaatggccaacctatcaaacttgctattgtcccc
tcaggacctggccctcgccgcaatccttttgacactgcgatcatgcctgggcgtccactc
gcggagcgcatcaccgttcccggcggacgcagccgctccttgtctccaggtcgagatcga
gacggagccgctcgtaagggtattgataggtacgtacccggtggcaatggcagtcggtct
cggagtcccctacccaatagaagaagggagggtggccgacgtcctggcgcgaggagagag
ggccgtggtgcacgacgggatgagggagagcgcaaaggaagagagggtcgcaccaagaaa
actcaggaagaactagatgccgagatggacgactacttcggcggcggcgaacctgcacat
tccgtagcgccgtcgaatggaaacggtcaggcaacagaggcgacaggggatgatattgac
atgatcgaataa
DBGET
integrated database retrieval system
