KEGG   Phaeoacremonium minimum: UCRPA7_7695
Entry
UCRPA7_7695       CDS       T03102                                 
Name
(RefSeq) putative u4 u6 small nuclear ribonucleoprotein prp4 protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tmn  Phaeoacremonium minimum
Pathway
tmn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tmn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UCRPA7_7695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tmn03041]
    UCRPA7_7695
Spliceosome [BR:tmn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    UCRPA7_7695
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_Gbeta WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st PRP4 Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_TEP1_C WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_HPS5 WDR54 Beta-prop_RIG_1st Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_IFT140_1st Tricorn_2nd Beta-prop_WDR19_1st WD40_RFWD3
Other DBs
NCBI-GeneID: 19328475
NCBI-ProteinID: XP_007918410
UniProt: R8BC61
LinkDB
Position
Unknown
AA seq 521 aa
MMHPSRRAYVEDAEPEDRGMELSDVPVDYNYDLPTSSGIAPEKASAILSQFERKRLAATI
AVPTDDGRVRAKLRELGEPVTLFGEDAADRRSRLREILTTQAEQAGQENGDVAMEDAPDA
EEEADEQEEEFYSRGGDALLQARIEIANYSLPRAKKRVAFQREEAKIPLRTHVKFRKQVK
ERLQAFELQGSQTAGDRHVSMTRISPGGNLIATGNWGGQVKLIDLPSLDPVRTFRGHTNK
ISGLSWYPGATLPENNVSPDSVNLASGGAEGQIHLWSLNKDTPLASLEGHSQRVCRVEFH
PSGKYLASASEDTSWRLWDIETTQELLLQEGHSRGVFAVSFNTDGSLLASAGLDSIGRIW
DLRSGRTVMILDGHMDGHIKPITGLDWGSDGHRVLSASQDGWIKCWDVRKVQRTGGVGAH
TSAVSDVRWYKGLDDPLEGVAPGVDEKGAQLPKKSGTFFVSSGFDHKVNIFSADDWTMIQ
SLSGHTGPVASVDISRDGRWIVSGGHDRTVKLWGRNDGEGV
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgatgcacccatcgaggagggcgtacgtcgaggacgcagagcctgaggatcggggaatg
gaactctctgatgttcctgtcgactacaactacgaccttcccacatcatctgggattgct
cccgagaaagcatcggcaatcctctcacaattcgagcgcaagcgacttgccgccaccatc
gcggttccgacagacgatgggagggtacgtgcaaagcttcgtgaactcggcgagccagtc
accctgttcggcgaagatgcggcggatagacgatcaagattacgggagattctcacgacg
caggcagagcaggcaggacaagaaaacggggatgttgccatggaagatgcgcccgacgct
gaggaggaagctgacgagcaggaggaagagttctactcgagaggtggcgacgccctcctg
caagcaagaattgagatagcaaactactcgcttccgagggcaaagaagagagtagctttc
caaagggaagaagccaagataccgttgcgaacacacgtcaagtttcgaaagcaggtcaag
gagagattacaggcctttgagctacaaggaagtcagactgctggtgatagacatgtgagc
atgacgaggatatccccaggtggcaatcttatcgcgacaggaaactggggaggccaggtg
aagctcatcgacttaccgagcttggacccagttagaacgttcaggggccacacgaacaag
atcagcggcctgtcttggtacccaggcgcaacactcccagagaataacgtctcaccggac
tcagtcaacctcgcttctggaggtgcagaaggacaaatacatctatggtctctgaacaag
gacacaccactagcgagtcttgaaggccatagccagcgagtgtgccgcgtcgagtttcat
ccatctgggaaatacttggcttccgcatcagaagatacctcctggagactatgggacatc
gagactacccaggagctactgcttcaagaaggacactctcgcggcgtattcgctgtaagc
ttcaacaccgacgggtcgcttttggcaagcgcaggactggacagcatcgggcggatctgg
gatttacgttcaggtcgaacggtcatgatcctggatggccacatggatggacatatcaaa
cctatcaccggtttagattggggctccgatggccatcgtgttctgagcgcgtcgcaagat
gggtggatcaagtgttgggatgtgaggaaggttcagagaaccggcggtgttggcgcacac
acgagcgccgtgtcagatgtgagatggtacaaaggtcttgatgatccactggaaggcgtg
gcccctggagtcgatgagaaaggcgcccagttaccgaagaagtcagggacatttttcgtg
tcaagcggcttcgaccacaaggtcaacatattttctgccgatgactggacgatgatccag
tccctaagtggccataccgggccagtggccagcgtcgatataagccgagatggaaggtgg
attgtcagtggtggccatgatcgcacagtcaagctctgggggcgcaatgatggggaaggg
gtgtag

DBGET integrated database retrieval system