Phaeoacremonium minimum: UCRPA7_773
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Entry
UCRPA7_773 CDS
T03102
Name
(RefSeq) putative polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03015
mRNA surveillance pathway
tmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
UCRPA7_773
09123 Folding, sorting and degradation
03018 RNA degradation
UCRPA7_773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_773
03041 Spliceosome [BR:
tmn03041
]
UCRPA7_773
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
UCRPA7_773
mRNA cycle factors
Stress granule specific factors
UCRPA7_773
Spliceosome [BR:
tmn03041
]
Complex C
Other components
Complex C specific factors
UCRPA7_773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_7
RBD_DEAH11
RRM_5
PABC_AtC3H46
YflT
DUF3408
Motif
Other DBs
NCBI-GeneID:
19328513
NCBI-ProteinID:
XP_007911557
UniProt:
R8BWL4
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MAASVTSGAVDQLASDLGNTNLNGDNKAPAINTNVAGDFQGDDIDTAGPTPSSAAPHPQA
SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNATADGEKAL
EELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCK
VAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEEMKA
NFTNIYVKNISAEVTDDEFRELFEKFGDVTSSSLARDQETGKSRGFGFVNFTTHEAAAKA
VDDLNGKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDD
DKLRQMFSEFGPITSAKVMRDQLSEDDDEEKEDKDEKDKENQKEPEEPKEDEESADKKSE
KKSGDRKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLEAS
IQARNQLRMQQAAAAAGMPQQYIQPPVFYAPGQQPGFMPPGGGRGNMGFPQPAMGMPGVQ
GGRPGQFPAGYAGQQGGRGMAPQQMPPNMYGIPGQFPPGAPYAQPNNPQFIAAMQQVQQQ
AAALAGGRGVQPGRGPMQGMAGIPGMQGPAMPGYPPNNRQQGGVGGGRGNAGGRGPQFPT
GPQGGRGAQGQAPGGPDLNAASLLQSQLAAAAPPQQKQMLGEAIFPKIQAMQPELAGKIT
GMLLEMENQELINLIEDDTALRNKVDEAMAVYDEYVKQQGGDEDDKKDEKAEEKA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttctgtgacctccggcgctgttgaccagctcgcctctgacctcggcaacacc
aacctgaacggtgacaacaaggctcctgccatcaacaccaacgtcgctggtgatttccag
ggcgatgatatcgatactgctggccccacccccagctctgctgccccccacccccaggct
tctgcctcgctctacgtcggcgagctcgatccctccgtcaccgaagccatgctcttcgag
ctcttctctcagatcggctccgttgcctcgatccgtgtctgccgcgatgctgtcactcga
cgctccctcggctatgcctacgtcaactacaatgccactgctgatggcgagaaggccctc
gaggagctgaactatactctcatcaagggtcgcccttgccgcatcatgtggtctcagcgt
gatcccgccctgcgcaagactggtcagggcaatgtcttcatcaagaaccttgatgttgcc
atcgacaacaaggctctgcacgacacctttgccgccttcggcaacattctgagctgcaag
gttgctcaggacgagaacggaaactccaagggctacggattcgttcactacgagactgat
gaggctgccgcgcaggccatcaagcacgtgaacggcatgttgctgaacgagaagaaggtc
tacgtcggtcatcacatccccaagaaggaccgccagagcaagtttgaggagatgaaggcg
aacttcaccaacatctacgtcaagaacatcagtgcagaggtgaccgatgatgagttccgt
gagctcttcgagaagttcggtgatgtcacatcctcgtctctggctcgggatcaggagact
ggcaaaagccgtggttttggcttcgtcaactttaccactcacgaggctgctgcgaaggct
gttgatgacctcaatggaaaggacttccatggccaggacctctacgtcggtcgtgctcag
aagaagcacgagcgcgaggaagagcttcgcaagtcttacgaggctgctcgtctcgagaag
gcaaacaagtatcagggtgtcaacctgtacatcaagaatttggacgacgatgttgacgac
gataagctgcgccagatgttttctgaatttggacctatcacttctgctaaggtcatgagg
gaccagctgtccgaggacgacgacgaggagaaggaagataaggatgagaaggacaaggag
aaccaaaaggagcccgaggagcccaaggaggacgaggagtccgccgataagaaatccgag
aagaagtctggagacaggaagctcggcaagagcaagggtttcggctttgtttgcttcagc
aaccctgacgatgccaccaaggctgttgccgagatgaaccagcgcatgatcaacggcaag
cctctgtacgtcgctctcgctcagcgcaaggatgttcgcaagagccagctggaggcaagc
atccaggcccgcaatcaactacgaatgcagcaggctgccgcagccgcgggcatgcctcag
cagtacatccagcctccggtcttctatgctcctggtcagcagcctggcttcatgccccct
ggtggtggacgtggcaacatgggcttcccacagcctgccatgggtatgccaggcgttcag
ggtggacgtcccggccagttccccgctggttacgctggtcagcagggtggccgtggcatg
gctccccagcagatgcctcctaacatgtacggcatccccggccagttcccgccaggcgct
ccctacgctcagccgaacaacccccagtttattgctgcgatgcagcaagtccagcaacag
gccgcagcccttgctggtggacgaggcgttcagccgggccgtggccccatgcagggcatg
gccggaatccccggcatgcaaggtcctgccatgccaggctaccccccgaacaaccgtcaa
cagggcggcgtgggtggaggccgtggcaacgctggtggacgtggtcctcagttccctact
ggcccacagggaggacgtggtgctcagggtcaggcaccaggtggtcctgatctgaatgcc
gccagccttcttcagtcacagctggctgctgccgcgccgccccagcagaagcagatgctt
ggagaggccatcttccccaagattcaggccatgcagccagagttggccggcaagatcacg
ggcatgttgctagagatggagaaccaggagctcatcaaccttattgaggatgatactgcc
ctgcgcaacaaggttgatgaagccatggctgtctatgatgaatacgtcaagcagcagggt
ggtgacgaagacgacaagaaggacgagaaggctgaggagaaggcttag
DBGET
integrated database retrieval system
