Phaeoacremonium minimum: UCRPA7_813
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Entry
UCRPA7_813 CDS
T03102
Name
(RefSeq) putative atp-dependent rrna helicase spb-4 protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tmn
Phaeoacremonium minimum
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmn03009
]
UCRPA7_813
Enzymes [BR:
tmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UCRPA7_813
Ribosome biogenesis [BR:
tmn03009
]
Eukaryotic type
Pre-60S particles
Helicases
UCRPA7_813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
19328953
NCBI-ProteinID:
XP_007911596
UniProt:
R8BW64
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MPPENAPKKKDLRAWDALTPPLSDFILDAVQSMGFSRMTPVQAAVLPLFRKNSDVVVEAV
TGSGKTLAFLLPILERILRSEESLKKHYVTGIIVSPTRELAIQIHNVLLSILAFHPASAE
ILLCLKTEEKRPTTTEPVIVPQLVVGGSTKPQADLAFFVRHSPNLIVATPGRLAELLASP
HVHTSSLEVLVLDEADRLLDLGFKGDLQRILGYLPKQRRTGLFSASMSEAVNELIRVGLR
NPQRVAVTVKSLKDGGVVEERKTPASLQMTYVITPASKKFPTLMQLLTNLEPRPSKSIVF
LRVTDLDWVDLAAGFGLLQLPKMPELKGLDIDRALGLGIDVEAITFKDKSKEKKRQAEIA
EREANKDDIDAAAAQRAQKRRKNEAWSEKHERAETRVARREKKQRKREAARLASMTDVEK
EEQKKLDKMIEEIRQHNEQQKAGAAEDDSFEGFGN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcctccggagaatgcgcccaagaagaaggaccttcgggcctgggacgccctcacccct
ccactctccgacttcatcctcgacgccgttcagtctatgggcttctcgcgaatgacaccg
gtacaagccgcagtattgcccttgtttcgcaagaacagtgatgtggtggtcgaagccgtt
accggtagcggaaagacgttggcattccttctgccaatattggagagaatccttcgatca
gaggaatcgctgaagaaacactatgtcaccggcatcatcgtcagtcctacgagggagttg
gcaattcagatccacaatgtactgctctcgatcctcgcattccatcctgcctcggccgag
attcttctctgtctgaagaccgaagaaaagcgacctaccacgaccgagcctgttatcgtc
ccgcagcttgtcgtcggtggctcaacgaagccgcaagcagatctcgccttcttcgtgagg
cactccccgaaccttattgttgcaacacctggccgattggccgagctgctagcatctcca
cacgttcatacctcttccctagaagtcttggtcctcgacgaagccgaccgactcctcgat
ttgggtttcaagggcgatttacagaggatactgggctatcttcccaaacaaagaaggaca
ggcctattttcggcaagcatgtccgaagcagtgaatgagttgatcagagtgggattacgg
aacccgcaacgtgtagcagttacggtcaagagtctgaaagatggcggcgtcgtagaagag
aggaaaactcctgcgagtttacaaatgacatatgtgatcacgcctgcgagcaagaagttc
ccgactctgatgcagctattgacaaacctggaaccaagaccgtcaaaaagcatcgtgttt
ttgagagtcaccgacctcgattgggtggacctcgcagctggctttgggctccttcaactg
ccaaagatgccagagctcaaaggcctggatatagaccgggctcttggcctcggcatcgat
gttgaggccatcacgttcaaggacaagtctaaggagaagaaacggcaggccgagatagct
gagagggaggccaataaggatgacatagatgctgctgcagcacagcgtgcccagaagagg
aggaagaacgaggcctggagcgaaaagcacgagagggcagagacgagagtcgcgagaaga
gagaagaagcagcggaagagggaggcagctagacttgcaagcatgacggatgttgagaag
gaggaacagaagaagcttgacaagatgattgaagagatcaggcaacataatgagcagcag
aaagcaggggcggccgaagacgactcatttgagggctttgggaattag
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