Phaeoacremonium minimum: UCRPA7_853
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Entry
UCRPA7_853 CDS
T03102
Name
(RefSeq) putative pre-mrna splicing factor atp-dependent rna helicase prp43 protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRPA7_853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmn03041
]
UCRPA7_853
03009 Ribosome biogenesis [BR:
tmn03009
]
UCRPA7_853
Enzymes [BR:
tmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCRPA7_853
Spliceosome [BR:
tmn03041
]
Complex A
U2 snRNP components
U2 related factors
UCRPA7_853
Complex B
UCRPA7_853
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
UCRPA7_853
Ribosome biogenesis [BR:
tmn03009
]
Eukaryotic type
90S particles
Helicases
UCRPA7_853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
HA2_N
AAA_19
SRP54
AAA_30
T2SSE
ResIII
AAA_23
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
19329389
NCBI-ProteinID:
XP_007911635
UniProt:
R8BWD6
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MKRVKQDSDDMAPVKSEKKDGYNPYLAHQYEAEEKKGFGNSSAWPLFNGVTRHETTAKQA
EKIEDNDLNAWTGEVHSQQYFKILKTRRDLPVQKQRQEFLDIYHSTQIMVFVGETGSGKT
TQIPQYVLYDELPQFHGKLVACTQPRRVAAMSVAQRVADELDVSLGEEVGYSIRFENKTG
PKTVLKYMTDGQLLREAMHDHDMTRYSCIILDEAHERTLATDILMALLKQIALRRKDLKI
IIMSATLDAQKFQRYFYDAPLLAVPGRTHPVEIFYTPEAEKDYIEASIRTVLQIHATEAE
GDILLFLTGEEEIEDACRRIRLEVDEMVRESDAGPMVVYPLYGTLPPAQQQRIFDKAPEP
LQKGGRPGRKCIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASA
QQRAGRAGRTRPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELKKLGVEDLVHFD
LMDPPAPETMMRALEELNYLACLDDDGELTQLGSLASEFPLDPALAVMLISSPEFYCSNE
MLSITALLSVPQIFVRPNSNRRRADEMKELFAHPEGDHLTLLNAYHAFKGKMTQGEDMKK
WCHEHFLSQRHLTTADDVRSQLKRIMETHGVELISTPFEDKNYYTNIRRALLAGFFMQVA
MKEANGKTYRTIKDDQLVMLHPSTVLKTGYDWVVYNEFVLTSKQYIRTVTGIRPEWLLEI
APIYYDLDTFERGDVKTALTRVTERIRRKKAMKGSQA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagttaagcaggattccgacgacatggcgccggtcaagtcggaaaagaaggat
ggctacaacccatatctcgcccaccagtacgaggctgaggagaaaaagggctttgggaac
tcgagcgcctggcccctgtttaacggcgtgacgcgccacgagaccactgcgaaacaggcg
gagaagatcgaggacaacgacctgaacgcctggacgggagaggtgcactcacagcaatac
ttcaagatcctcaagacgaggcgggacctccccgtccagaagcaacggcaggaattcctc
gacatctaccacagcacgcaaattatggtctttgttggtgagactggttcgggaaaaact
actcagattccacaatacgttctgtatgacgagctgccacagtttcatggaaagctggtt
gcctgcacgcagccgcgacgagtggcagccatgtcagttgcgcagcgtgtggcagacgag
cttgacgtgagtctcggagaggaggttggatacagcatccgtttcgagaataaaactgga
cccaagactgttctcaagtacatgaccgatggtcagcttctccgggaggccatgcacgac
cacgatatgacccgatacagctgcatcattctcgacgaggcgcacgagagaaccctggca
actgatattctgatggcacttctcaagcagattgctctgcgacgcaaagacctcaagatc
atcatcatgtcggctactctagacgcgcaaaagttccagcgttacttctacgatgcgccg
ctccttgctgtgcctggtcgtacacatccagtcgagatcttctacacacccgaggccgag
aaggactatattgaggcatcgatacgaacggtgcttcagattcacgccacagaagccgaa
ggtgacattctgctgttcctcaccggtgaagaggagattgaggatgcctgtcgacgtatt
cgcttggaggtagacgagatggttcgagagtcagacgccggaccgatggtcgtttacccc
ctatacggtactctgccacccgcgcaacagcaacgcatatttgacaaggctccggagcct
cttcagaagggtggtcgtccgggacggaagtgcattatttcgaccaatattgccgaaact
tcgctgacaatcgatggaatcgtgtacgtcgttgatcctggtttcagcaagcagaagatc
tacaaccctcgaatcagggttgaatctttactcgtctctcctatttctaaagcttcggca
caacaacgagctggcagagctggtcgaacaaggcctggtaaatgtttcaggttgtacaca
gaaaaggcgttcaagaaggagctcattgagcagacatacccagagattctgcggtctaac
ttggcaaacaccgtgctagagttgaagaagcttggagtcgaagatctggtgcattttgat
ctgatggaccccccggctccggagacaatgatgcgtgcgctcgaggagttgaactatctg
gcatgtctcgacgacgatggcgaactgacacagcttggcagcctagcttccgagttccct
ctggatccagctcttgccgtcatgcttatctcttcgcccgaattctactgttccaacgag
atgctctctatcaccgcgctcctgtctgtgcctcaaatcttcgttcgcccgaacagcaac
aggaggcgagccgacgagatgaaggagctgtttgctcatcctgagggcgaccacctgacc
ctgctcaacgcgtaccatgccttcaaaggcaagatgacccagggcgaggacatgaagaag
tggtgccacgagcacttcctctcgcagcgtcatttgactaccgcagacgacgtccggtca
cagctgaagcggatcatggagacgcacggagtcgagctgatcagcacgccattcgaggac
aagaattactacaccaacatccgaagagcacttctagcaggtttcttcatgcaagttgcc
atgaaggaggcgaacggcaagacgtatcgcaccatcaaggacgaccagcttgtcatgctc
caccccagcactgtcctgaagactggatacgactgggtggtgtacaacgagttcgtcctc
acctcgaagcagtacattcgaacagtcaccggtattcgccccgagtggcttctggaaatt
gcacctatctactatgatctagacacattcgaacggggtgacgtgaagactgcgctcacc
cgggtgacagaacggatccgaagaaagaaggccatgaagggcagtcaggcctag
DBGET
integrated database retrieval system
