Phaeoacremonium minimum: UCRPA7_8701
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Entry
UCRPA7_8701 CDS
T03102
Name
(RefSeq) putative exosome complex exonuclease rrp41 protein
KO
K11600
exosome complex component RRP41
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRPA7_8701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_8701
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
UCRPA7_8701
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
UCRPA7_8701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF4813
Motif
Other DBs
NCBI-GeneID:
19329579
NCBI-ProteinID:
XP_007919403
UniProt:
R8B971
LinkDB
All DBs
Position
Unknown
AA seq
272 aa
AA seq
DB search
MPLDTSAYSLALLRVDGRRWNELRRCHAQIRTQAAADGSSYLEMGNTKVMCVVNGPTEPR
RGGAGGGGGASEQTKEAQVIVSIVVAGFSSVDRKRRGRGDKRIQEMQTTISRALSSTLHT
HLFPHSTINVSLHVLSQDGSLLAALINASALAAIDAGIPMTDYVAACTAGSTSSYAANDE
AADPLLDLNQQEEQELPSLTVATLGESDKVVVLVCESRVQVARLEGMLAVGVDGCKQVRE
ILDQVVREKGGRMVREGVVEKGVGVGDMDIDG
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgacacctcggcctactccctggcgctgctgcgagtcgacggccgccgctgg
aacgagctgcgacgatgccatgcccagatccgcacccaggctgctgccgatggctccagc
tacctcgagatgggcaacacgaaggttatgtgcgtggtgaacggaccgactgaacctcgg
cgaggtggcgcgggaggaggtggcggcgcaagcgagcagaccaaagaggcgcaggtcatc
gtgagcatcgtcgtcgcgggtttcagctccgtcgaccgcaagcggcggggacggggcgac
aagcgcatccaggaaatgcaaacgaccatctcgcgcgccctctcgagcacgctgcacacg
cacctcttcccgcactcgaccatcaacgtctcgctgcacgtgctcagccaggacggctcg
ctgctggcggcgctgatcaatgcgtccgcgctggcggccatcgacgccggcatcccgatg
acggactacgtcgccgcctgcacggcgggcagcacctcgagctacgcggccaacgacgag
gccgccgacccgctgctggacctcaaccagcaggaggagcaggagctgccgagcctgacg
gtcgcgacgctcggcgagagcgacaaggtcgttgtgctcgtgtgcgagagccgggtgcag
gtcgctaggctggagggcatgctcgctgtcggtgttgacggatgcaagcaggtgcgagag
atcttggaccaagtagtgagagagaagggaggacgtatggtgcgagagggagtggtagag
aaaggcgtgggcgtcggggatatggacatcgacggttga
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