Phaeoacremonium minimum: UCRPA7_989
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Entry
UCRPA7_989 CDS
T03102
Name
(RefSeq) putative ccr4-not transcription complex protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRPA7_989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_989
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCRPA7_989
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UCRPA7_989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
EAD9
Cep57_MT_bd
DUF7310
WKF
DUF1192
Med10
Transcrip_reg
Motif
Other DBs
NCBI-GeneID:
19329928
NCBI-ProteinID:
XP_007911769
UniProt:
R8BW00
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MAARKLAQEVDKCFKKVAEGVGEFEAIYEKIEQSNNPAQKEKLEDNLKREIKKLQRLRDQ
IKTWAASNDIKDKAPLLEHRRLIETQMEKFKAVEKAMKTKAYSKEGLSAAAKLDPKEQAK
MEASDFLSSMVDELEQQIEALEAESESIQATMKKGKGHSAKADRMAEIERLIERHKWHQG
KLELIQRSLQNGGVETEEVTDLEESIRYYVTDGMNDDFMEDDTMYDDLDLHEDEDAFGLV
GDNDKVSSQDTQSVQEEPIEVESRSGSIPGGKPRTVADNVSAAGGRRPSTQLKSPLPTLA
TLHTPLPTISNGAPSSNASMKPATVPARPAEGLKYASAAAAAAANDKNNVGIAPLPPPPG
AAPPVPAMGIAPLPPVQTKISTNNSPSVTSVQPAASSSAQVPEQRPTPPTQTSSTAVGSS
SSTAKSESAKPVSSRAAGKAPAAPEPVAAPKPPLTNGVTNGAKPVAEEEQEEESIYHLPA
SLQDLVEAFETTKRKPTSPNSPSTLRMLAASQASAPDAMDSEAPRNYHPDMYYNSPAAYP
REPLSIFDDPRLYSRIDPDTLFYVFYYKQGTYQQYLAAKALKDQSWRFHKQYQTWFQRHE
EPKSITEEFEQGTYRFFDYESTWMNRRKADFKFAYKFLEDDV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaggaagctggcccaggaagtggacaaatgcttcaagaaggtcgccgaaggc
gtcggcgaattcgaggcaatctacgagaagatcgaacagtcaaataatcccgcccagaag
gagaagctcgaggacaacctcaagcgcgaaatcaagaagctccaaagattacgagatcag
atcaaaacatgggccgccagcaacgacatcaaggacaaggctcctttgctggagcaccgg
cggttgatcgagacgcaaatggagaaattcaaagccgtcgagaaggcgatgaagaccaag
gcgtactcgaaagaaggactgtccgctgccgcgaagctggatcccaaagagcaagcgaag
atggaggctagtgacttcctaagtagcatggtcgatgagctggagcagcaaatagaagcg
ttagaagccgaaagcgagtcgatacaggccacaatgaagaaaggcaagggccacagtgca
aaggcggatcgcatggccgaaatcgagcggttaatagagcggcataagtggcatcaaggg
aaacttgagctgatacaacgctccttgcaaaacggcggcgtggagacggaagaggttacc
gacctcgaggagagcatacgatattatgtcaccgatggcatgaacgacgatttcatggag
gacgataccatgtatgatgatctagatctacacgaagatgaggatgcgtttggcctggta
ggtgacaacgacaaggtttcatcgcaagatacccagtcggttcaagaagagccaattgag
gtcgaaagccggtcagggagcataccaggcgggaagccgcggacggtggcagacaatgtt
agtgcggccggtggacgacgaccatcgacgcaactcaagtcgccccttccaacgcttgca
acactgcatacgccacttccgacaatcagcaacggtgctccttcgagtaacgcctccatg
aagccggcaaccgtcccggcgcggccagctgaaggtttgaagtatgcttcagctgcggct
gcggctgctgcaaacgacaagaacaacgttggcatcgcacctctacctccaccgcctggt
gcagcacccccagttcccgccatgggtatcgcccccttaccgcccgtccaaacgaagata
agcaccaacaactcgccaagcgtcacctcggttcaaccagctgcgtccagctcggcacaa
gtgccggagcaaagaccaactccacccacccaaacaagtagcacagcggttggctcttca
tcttcaacggcgaagtcagagtctgcaaaaccggtgtcctcacgcgctgcaggcaaggcg
ccagcggctccagagcctgtggcagcacccaaacctcccctgacgaatggcgtgacaaat
ggtgcgaaacctgttgctgaggaggagcaagaagaggagtcgatatatcacctcccagca
tcattacaagatctggtggaggcgtttgaaacgacgaagcggaagcccacctcaccaaac
tctccatctaccttgcggatgcttgcagcctcacaagcaagcgcccctgatgccatggac
tcggaggcaccgaggaattaccacccagacatgtactacaactcccctgcggcgtatccc
cgtgaacccctctccatcttcgatgatccacgactctactctcgaatcgatccagacact
ttgttctacgtcttctactacaagcagggcacttaccaacagtatctggctgccaaagcg
ctgaaagatcagtcatggagattccacaagcaatatcaaacctggttccagagacatgag
gagcccaagagcattacagaggagttcgagcaaggcacgtatcgcttcttcgactacgag
agcacatggatgaataggaggaaagcagacttcaagtttgcctacaaattcctcgaggac
gatgtatga
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