Tistrella mobilis: TMO_0400
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Entry
TMO_0400 CDS
T02128
Symbol
ybiO
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
tmo
Tistrella mobilis
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmo02000
]
TMO_0400 (ybiO)
Transporters [BR:
tmo02000
]
Other transporters
Pores ion channels [TC:
1
]
TMO_0400 (ybiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AFK52239
UniProt:
I3THK1
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All DBs
Position
435428..438028
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AA seq
866 aa
AA seq
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MLRLTAFARLLRIVPALLVCLLLLTTIAVAPLQAQTLPGLPSTGSGSADTATSDGQAEVD
ALIKLLENPEGREKLIERLKAAETPAEPAEGEELAAELVMPFLDGPATVIANRLDALGRD
LQKAAVALSHTPDELERIGRGLANDRKREQWIELIGRLAAVVAAGFLLEWIVKALLSRPR
RRLGTNPPASRWRRAARGICLLLIDLLGIAGFAGGAAAATALVRPTGDAAMIAIAVVQAN
IAVRAILAAGRMALRPQVRRLRPLPFSDETAAYLYIWLKRFARITVYGWFLYDVARTLGV
SPPVLLVASKVFGLFVASLAAVVVLQNRREVADVIAGRRPLQFGADDVPGTEAAMADPGD
GSAPLGVTPAEADVRTADDDVPPDLAAAAADRAREVTRAGMATLRARLADVWHVLALAYV
AIAAGIWLLGVDGGFTFLAQATGATVLILLLDRVAVMAAERMLERLFSVSDEFILRHPGI
ETRVNRYLSITRTAIVGFIHVFAVLALLEVWGLGGLAWLASDAGARVVGALVKIVVFVVG
AAVIWEMVDGAISRRLQSDGDRAPTTRAKTLLPMLRNVVMIILTLVVVLTVFSEIGIDIA
PLLAGAGVVGLAIGFGAQTLVKDFITGAFILFEDTISVGDVVTVAGQTGAVERMTVRTIR
LRDVEGVVRTVPFSAVDIVQNLTKDFSYALLDISVAYRENVGEVAEMMREVGLAMGHDPE
FRDLILQPIEIFGLDRFGASDVVVRGRIMTKPGQQWGIKRAFFARIKQVFDERGIEIPFP
HTTLYFGVGKDGKAPAAPVQVLKAEGSWRSGATGHAAPKLPAVAPAAEDPEDRRDVRAVP
GDEDSRRPPRIDEESGEAGGDSQPSR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccttaccgccttcgcccgcctgctccggattgttccggctcttctggtctgc
ctgcttcttctgacgacgatcgccgtcgccccgctgcaggcccagaccctgcccggactg
ccctccacaggttccggctccgccgataccgccaccagcgacggtcaggcggaggtcgat
gcgctgatcaagctgctcgagaacccggagggccgggagaagctgatcgagcgcctgaag
gcggcggaaaccccggcggagcccgccgagggcgaggaacttgcagccgaactggtgatg
cctttccttgacggtccggcgacggtgatcgccaaccgcctggatgcgctggggcgtgat
ctgcagaaggcggcggtcgcgctgtcgcatacgcccgacgagctggagcgtatcggccgc
ggccttgccaacgacaggaagcgggagcagtggattgagctgatcggccgtctggcggcg
gtggttgctgcgggctttctgctggaatggattgtaaaagcgctgctgtcgcgcccccgt
cgccggctcgggaccaacccgccggcctcgcgctggcgccgggctgcacgcggtatctgc
ctgctgctgatcgatcttctgggtattgccggctttgcgggcggtgccgccgcggccacc
gccctggtgcgcccgacgggcgacgctgcgatgatcgcgatcgccgtcgtgcaggccaat
atcgccgtgcgcgcgatactggcggccgggcgcatggcgcttcgtccgcaggtgcgccgg
cttcggccgctgcccttctctgacgaaaccgccgcctatctctacatctggctgaagcgc
tttgcgcgcatcaccgtctatggctggttcctgtacgacgtcgcccggacgctcggggtc
tcgccgccggtgctgctggtcgcgtccaaggtcttcggcctgttcgtggccagcctggcg
gcggtggtggtgctgcagaaccgccgcgaggtcgccgatgtgatcgccggccgccggccg
ctccagttcggtgccgacgacgtgccgggcaccgaggcggcgatggccgatcccggcgac
gggtcggcaccgctcggggtgacgccggcagaggcggatgtccggaccgccgacgacgac
gttccgcccgatcttgccgccgccgccgccgaccgggcgcgcgaggtgacgcgtgcgggc
atggcgaccctgcgcgcgcgtctcgccgatgtctggcatgtgctggcgctggcctatgtc
gccattgcggccgggatctggctgctgggggtcgatggcggtttcaccttcctggcgcag
gcgaccggcgccaccgtcctgatcctgctgctggaccgggtggcggtgatggcggcggaa
cggatgctggagcggctgttctcggtctcggacgagttcatcctgcgccatcccggcatc
gaaacccgggtgaaccgctatctgtccatcacccgtaccgccatcgtcggcttcatccat
gtctttgcggtgctggcgctgctcgaagtctgggggctgggcggtctggcctggctcgcc
tccgacgccggcgcccgggtggtgggggcgctggtcaagatcgtggtcttcgtggtcggt
gccgcggtgatctgggaaatggtcgatggggccatttcgcggcgcctgcaatccgatggc
gatcgcgcgcccaccacgcgcgccaagaccctgctgccgatgctgcgcaacgtggtcatg
atcatcctgaccctggtggtggtgctgaccgtcttctcggaaatcggcatcgacatcgcg
ccgctgctggccggtgccggcgtcgtcggcctcgccatcggtttcggtgcccagacgctg
gtcaaggacttcatcaccggcgccttcatcctgttcgaagacacgatctcggttggcgac
gtggtcaccgtcgccggccagaccggggcggtggaacgcatgaccgtgcgcaccatccgc
ctgcgcgacgtggagggtgtggtgcggaccgtgccgttcagcgccgtcgacatcgtccag
aacctgaccaaggacttctcctacgccctgctggatatcagcgtcgcctatcgcgagaat
gtgggcgaggtggccgagatgatgcgcgaggtcgggctggccatggggcacgatccggag
ttccgggatctgatccttcagccgatcgagattttcggcctcgaccgcttcggtgccagc
gacgtggtcgtccgcggccggatcatgacgaagcccggccagcaatgggggatcaagcgc
gccttctttgcccgcatcaagcaggtcttcgacgagcgcggcatcgagatccccttcccg
cacaccacgctctatttcggcgtgggcaaggatggcaaggcgccggctgcgccggtgcag
gtgctcaaggccgaaggctcctggcgctcgggtgcgacgggacatgcggcccccaagctg
ccggcggtggcaccagcggcagaggatcccgaggaccggcgcgacgttcgtgcggtaccc
ggcgacgaagacagccgtcgcccgccgcggatcgacgaggagtcgggcgaagcgggtggc
gactcccagccctcacgttga
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