Tistrella mobilis: TMO_0584
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Entry
TMO_0584 CDS
T02128
Symbol
dacF
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
tmo
Tistrella mobilis
Pathway
tmo00550
Peptidoglycan biosynthesis
tmo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TMO_0584 (dacF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tmo01002
]
TMO_0584 (dacF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tmo01011
]
TMO_0584 (dacF)
Enzymes [BR:
tmo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TMO_0584 (dacF)
Peptidases and inhibitors [BR:
tmo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
TMO_0584 (dacF)
Peptidoglycan biosynthesis and degradation proteins [BR:
tmo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
TMO_0584 (dacF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Motif
Other DBs
NCBI-ProteinID:
AFK52423
UniProt:
I3TI35
LinkDB
All DBs
Position
complement(652757..654331)
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AA seq
524 aa
AA seq
DB search
MTFGRNSRLRIALPDGCARPGAFARRPAALPAIGLVRLMMVLLVALIAGTGFARTAAAGY
AALIVEAETGRVLYAKNADVRNYPASLTKMMTLYMTFEALKAKRLTMDQALPVSARAAGM
APTKLGLRAGQTIRVEDAIYGLITKSANDAAVVLAEALGGSEIAFARMMTAKARKLGMDK
TTFQNANGLPNRHQFSTARDMATLAVHLMNDFPREYAMFSTKSYSYKGQALRNHNRMLSS
YTGTDGIKTGYTRASGFNIVVSAVRDDHRLIGVIFGGSSAASRDQAVAGLLDKAFVRLAA
ESPAERQRAIAQARARGELQIAKLERDLDDIGGASVKVASISDAQVRAAEREMTGEAAIA
AVDEDDAEFGSDAAPQATVQTAALEVPAAAPVAAAPVAATPVAAVAAAPAPQPVAQGDTQ
YAAIAPKPRVFDTQGRWGIQFGAFGRVDAAQGLVTRAQDLLPADLRGGAQTAVEPHAIGG
RYIYRARMMGFEGERPARQACALLDKRGIACILVPPITALSAAG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacattcggtcgcaacagccggctgcggattgccctgcccgacggatgcgcccggcct
ggcgcctttgcccgtcggcccgccgctctgcccgccatcggcctggtccggctgatgatg
gtgctgctggtggcgctgatcgccggcaccggcttcgcccgcacggccgccgccggctat
gccgcattgatcgtggaggccgaaaccggccgcgtgctctatgcgaagaatgccgacgtg
cgcaactacccggcgtcgctcaccaagatgatgacgctgtacatgaccttcgaagcgctg
aaggcaaagcggctgaccatggatcaggcgctgccggtttcggcccgcgccgccggcatg
gcgcccaccaagctgggcctgcgcgccggccagaccatcagggtcgaggatgcgatctac
ggcctgatcaccaaatcggccaatgacgcggccgtggtgctggccgaggcgctgggcggc
agtgaaatcgctttcgcgcgcatgatgaccgccaaggcccgcaagctgggcatggacaag
accaccttccagaacgccaacggcctgcccaaccggcatcagttctccaccgcccgcgac
atggcgacgctggccgtgcatctgatgaacgacttcccgcgggaatacgccatgttctcg
accaagtcgtacagctacaagggccaggccctgcgcaaccacaaccggatgctcagctct
tacaccggcaccgacgggatcaagaccggctatacccgcgcttcgggcttcaacatcgtg
gtctcggcggtgcgcgacgatcaccggctgatcggcgtgatcttcggcggctccagcgca
gcctcccgcgatcaggcggtggccgggctgctggacaaggccttcgtccgcctggcagcg
gaaagcccggccgagcgtcagcgcgccatcgcccaggcccgcgcccgcggcgaactgcag
atcgccaagctggagcgtgacctcgacgatatcggcggggcctcggtcaaggtcgcctcg
atcagcgacgcccaggtgagggcggccgaacgcgagatgaccggcgaggccgcaatcgcc
gccgtcgatgaggacgatgccgagttcggcagcgatgccgctccccaggcgacagtccag
accgcagcgctcgaggttccggcagcagccccggttgcagcagccccggttgccgcgacg
ccggttgcggccgtggccgcggcccccgcgccgcagccggtcgcccagggcgacacccag
tatgccgccatcgccccgaagccgcgggtcttcgacacccagggtcgctggggcatccag
ttcggcgccttcggccgggtcgatgccgcccaggggctggtgacccgcgcccaggatctg
ctgccggccgatctgcggggcggcgcgcagaccgcggtggagccgcacgcaatcggcggc
cgctatatctaccgcgcccgcatgatgggtttcgagggcgagcgcccggcccgccaggcc
tgcgccctgctcgacaagcgcggcatcgcctgcatcctggtgccgccgatcacggcgctg
tccgccgccggctga
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