Tistrella mobilis: TMO_1941
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Entry
TMO_1941 CDS
T02128
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tmo
Tistrella mobilis
Pathway
tmo03410
Base excision repair
tmo03430
Mismatch repair
tmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TMO_1941 (recJ)
03430 Mismatch repair
TMO_1941 (recJ)
03440 Homologous recombination
TMO_1941 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_1941 (recJ)
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
TMO_1941 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TMO_1941 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TMO_1941 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
AFK53779
UniProt:
I3TLZ1
LinkDB
All DBs
Position
complement(2149024..2150814)
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AA seq
596 aa
AA seq
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MDVLLRDAAVLGVERSLGGRRWETRLADQRLGLALAQRLGLPEIVGRVLAGRGVGLDDAD
DFLNPSLRVALPDPSHLRDMDRAVDRLAAAIAAREPIAVFGDYDVDGATSTALVTRFLRG
IGVPVVVYIPDRMTEGYGPNAAAMTALAARGVRVVVTVDCGTTAFAALEAARAAHLDVVV
VDHHIGEPELPAALAVVNPNRFDETSPHGQMAAVGVAFLLLVGLNRALRDGGVYDRLGVK
PPDLMGLLDLVALGTVCDVVPLTGVNRAFVAQGIKVLARRRNTGLARLADIARLDEAPEA
YHLGYVLGPRINAGGRVGQADLGARLLGTDDPDEATGIAMELDRLNTERREIEAAVEAEA
LEAAERQADAPFILVAGDGWHPGVIGIVAGRIKERFHRPVFVVAVDSTTGIGKGSGRSVP
GVDLGSAVTAARQAGLLVNGGGHAMAAGLTVEVAQLVDLHAFLAERIVAQTGGEPPAPRL
GLDGVLAVGGATTDLVSVLERIGPFGTGNAQPRFALSGVRILKADVVGQGHIRVIMGAED
GSRLKGMAFRAADNAIGSALLQARGMPLHVAGGLRRDRWQGRDDVQMFIDDVAAAR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggacgttctgctccgtgatgccgcggttctcggcgtcgaacgctcgcttggcggacga
cgttgggaaacgcggctcgccgatcagcgcctgggattggcccttgcccagcgcctgggc
ctgcccgagatcgtcgggcgggtcctggcggggcgcggggtcggcctggacgatgccgac
gatttcctgaaccccagcctgcgtgtcgcactgcccgatccgtcgcatctgcgcgatatg
gaccgggccgtcgatcgtctggctgcggcgatcgccgcgcgtgagccgatcgcggtcttc
ggcgattacgatgtcgacggcgccacctccaccgcactcgtcacccggtttctgcgcggg
atcggcgtgccggtggtggtctatattcccgaccggatgaccgagggctatggccccaac
gccgcggccatgaccgcgctcgccgcccgtggcgtgcgggtggtggtgacggtcgactgc
ggcaccacggcattcgccgccctcgaggccgcacgggccgcccatctcgatgtggtggtc
gtcgatcatcatatcggcgagccggaactgccagcggccctcgccgtggtcaatcccaac
cgtttcgacgaaaccagcccccatggccagatggccgcggtgggcgtcgcctttctgctg
ctggtggggctcaaccgggccctgcgtgacggcggcgtgtatgacagactgggcgtcaag
ccgcccgatctgatgggactgctggatctcgtggcgctgggcaccgtctgcgacgtcgtg
ccgctgaccggtgtcaaccgggccttcgtcgctcagggcatcaaggtcttggcccggcgc
cgcaacaccgggctggcgcgactggccgacatcgcccgtctggacgaggcacccgaagcc
tatcatctgggctatgtgctggggccccggatcaatgccggcggccgtgtcggtcaggcc
gatctgggcgcgcgccttctcggcaccgacgatcccgacgaggctaccggcatcgccatg
gaactcgaccggctgaacaccgaacgccgcgagatcgaggcggcggtcgaggccgaagcg
ctcgaggccgccgaacgccaggccgatgcacccttcatcctggtcgcgggcgacggctgg
catccgggcgtgatcggcatcgtcgcggggcggatcaaggaacgcttccatcgcccggtc
ttcgtggtcgcggtcgatagcaccaccggcatcggcaagggctccggccgatctgtaccc
ggcgttgatctggggtccgccgtgacggccgcgcgtcaggccgggctgctggtcaatggc
ggcggccatgccatggcggccgggctgacggtcgaggtggcgcagctggtcgatctgcat
gccttcctggccgaacgcatcgtcgcccagaccggcggcgagccgccggccccgcggctg
ggcctggatggcgtgctggcggtcggcggggccaccaccgatctggtctcggtgctggag
cgtatcggcccattcgggaccggcaatgcccagccgcgcttcgcgttgtcgggcgtgcgg
atcctgaaggcggatgtcgtcggccaggggcatatccgggtgatcatgggcgccgaggat
ggctcgcggctgaagggcatggccttccgtgcggccgacaatgccatcggcagcgcgctg
cttcaggcgcgcggtatgcctttgcatgtggcgggcggcctcaggcgcgatcgctggcag
ggccgcgacgacgttcagatgttcatcgacgacgtggcggccgcccgctga
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