KEGG   Tistrella mobilis: TMO_2063
Entry
TMO_2063          CDS       T02128                                 
Name
(GenBank) ATP-dependent RNA helicase, DEAD
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tmo  Tistrella mobilis
Brite
KEGG Orthology (KO) [BR:tmo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmo03400]
    TMO_2063
Enzymes [BR:tmo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TMO_2063
    5.6.2.6  RNA 3'-5' helicase
     TMO_2063
DNA repair and recombination proteins [BR:tmo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    TMO_2063
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: AFK53901
UniProt: I3TMB3
LinkDB
Position
complement(2289044..2291518)
AA seq 824 aa
MSVHEPRLPVLVPDADLPPPAPLPAAVAGWFAARGWTPHPHQLRMLAAADAGLPVLLIAP
TGAGKTLGGFLPGLARAAAGEVAGRLDTIYISPLKALAADIARNLEQPIAEMGLGLQVGV
RTGDTDQRTRERQRRSPPELLLTTPESLALMLSYADAPRIFGRLATVIVDEVHAIAGTKR
GDLLALGLARLKSLSPGLRVVGLSATVADEEAVRRWVDPRAVIVRGREAAQAEVSLLIPE
GERVPWAGHLARHAMAGVYQAIRDHGTTLVFVNTRAQAELVFQELWHLNEDGLAIALHHG
SLAAEQRRKVEAAMAEGRLRAVVATSSLDLGIDWAAVDLVMQIGAPKGVSRLVQRIGRAN
HRLDLASKAILVPANRFEVLECRAALEAVAEGELDGEPPRPGALDVLAQHVLGTACMAPF
DADALYAEVTGSAPYAALDRPSFDAVVDFVATGGYALRAYDRFRRIEQDETGRWRVAGPV
AARQYRMNVGTIVEMPMLNVRLTKPGGRGMGGRMLGRIEEWFVQGLVPGDSFVFAGELLV
YEALRETDVLVSRGRGGDPRIPSYGGGRFPISASLARRVRGMLADPAHRDLLPPAVAEWL
AMQELRSELPGADGLLVETFPRAGRWFLIAYGFAGRNAHQTLGMLLTRRMERMGFRPMGF
VANDYAIAIWSLDAPERIDALFGQDMMGEDLEAWMAESSMLRRTFRNVAVIAGLIEQRHP
GREKTGRQVTFSSDLIYDVLRRHQPDHVLLKATWADAAGGLTDLGRLNDMLVAVQGRILH
RPLARVSPLAVPLLLEVGRESVPGQADDDLLGEAAALIEDATRG
NT seq 2475 nt   +upstreamnt  +downstreamnt
atgagcgtgcatgaaccccgtctgccggtgctggtgccggatgccgacctgccgccaccc
gcgccgctgcctgcggcggtggcgggctggtttgccgcgcgcggctggaccccgcacccc
caccagctgcgcatgctggccgccgcggatgccgggctgccggtgctgctgatcgcgccc
acgggggcaggcaagaccttgggcggattcctgcccggccttgcccgggcggcggcggga
gaggtggcgggccggctggataccatctacatttcgccgctgaaggcgcttgcggccgat
atcgcccgcaatctggagcagccgatcgccgaaatggggctggggctgcaggtgggggtg
cgcaccggcgataccgatcagcgcacccgcgaacgccagcgccgcagcccgcccgagctg
ctgctgaccacaccggaatcgctggcgctgatgctgtcctacgccgatgcgcccaggatc
ttcggccggctggcgacggtgatcgtcgacgaggtccacgccatcgccggcaccaaacgc
ggcgatctgctggcgctggggctcgcccgattgaagtcgctgtcgccggggctgcgcgtg
gtggggctgtcggcgacggtggcggatgaagaagcggtgcggcgctgggtcgatccgcgg
gcggtgatcgtgcgcgggcgcgaggcggcgcaggcagaggtctcgctgctgatcccggaa
ggcgagcgggtgccctgggcgggacatctggcccgccatgccatggccggggtctatcag
gcgatccgcgaccacggcaccacgctggttttcgtgaacacccgcgcccaggccgaactg
gtctttcaggaactctggcatctgaacgaggacgggctggcgatcgcgctgcaccatggc
agccttgcggccgagcagcggcgcaaggtcgaggcggcgatggccgaggggcggctaagg
gcggtggtggcgacctcctcgctggatctgggcatcgactgggcggcggtcgatctggtg
atgcagatcggcgcgccaaagggcgtgtcgcggctggtgcagcgcatcggccgggccaat
cacaggctcgacctggcatcgaaggccattctggtgccggccaaccggttcgaggtgctg
gaatgccgggcggcgctggaagcggtggccgagggcgagctggatggcgagccgccgcgg
ccgggtgcgctcgacgttctggcccagcatgttctgggcacggcctgcatggcgcctttc
gatgccgatgcgctgtatgccgaggtgaccggcagcgcgccctatgccgcactcgatcgc
ccgagtttcgatgcggtggtcgatttcgtcgccaccggtggctatgcgctcagggcctat
gaccgcttccggcggatcgagcaggacgagaccgggcgctggcgggtggcggggccggtg
gcggccagacaataccggatgaatgtcggcaccatcgtcgagatgccgatgctgaacgtg
cggctgacgaaacccggcggccgcggcatgggcggccggatgctggggcggatcgaggaa
tggttcgtccaggggctggtcccgggcgacagcttcgtcttcgccggcgaattgctggtt
tacgaggcgctgcgcgagaccgatgtgctggtcagccgcggccgcggcggcgaccccagg
atcccgtcctatggcggcggccgcttcccgatctcggcctcgcttgcccgccgggtgcgg
gggatgctggccgatccggcccatcgcgacctgctgccgccggcggtcgccgaatggctg
gcgatgcaggagctgcggtcggagctgccgggcgccgacgggctgctggtcgagaccttt
ccccgagccggccgctggttcctgatcgcctatggctttgccggacgcaacgcccatcag
acgctgggcatgctgctgacccgccggatggagcggatgggcttccggccgatgggcttc
gtcgccaacgactatgccattgcgatctggagcctggatgcgccggaacggatcgatgcc
ctgttcggccaggacatgatgggcgaggatctggaagcctggatggcggaatcgagcatg
ctgcggcggaccttccgcaatgtcgcggtgatcgccgggctgatcgagcagcgccatccg
ggacgcgagaagaccggccggcaggtgacgttcagctccgatctgatctatgacgtgctg
cgccgccatcagcccgatcatgtgctgctgaaggcgacctgggccgatgcggcgggcggg
ttgaccgatctcggccggctgaacgacatgctggtcgcggtgcagggccgcatcctgcac
cggcccctggccagggtttcaccgctggcggtgccgctgctgctggaggtggggcgcgaa
agcgtgcccggccaggccgatgacgacctgctgggcgaagccgccgccctgatcgaagac
gccacccgtggatga

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