Tistrella mobilis: TMO_2552
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Entry
TMO_2552 CDS
T02128
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tmo
Tistrella mobilis
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmo03032
]
TMO_2552 (topA)
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_2552 (topA)
Enzymes [BR:
tmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TMO_2552 (topA)
DNA replication proteins [BR:
tmo03032
]
Prokaryotic type
DNA Topoisomerases
TMO_2552 (topA)
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TMO_2552 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
AFK54390
UniProt:
I3TNQ2
LinkDB
All DBs
Position
2824023..2826851
Genome browser
AA seq
942 aa
AA seq
DB search
MKVVVVESPAKAKTINKYLGDDFKVLASYGHVSDLPAKDGSVRPDEDFAMTYEVDPKSEQ
HLKAIASALKGADQLFLATDPDREGEAISWHVHNALTRRGALKGVPVKRVVFHEITKSAV
QKAIANPRDIDMNLVNAQQARRALDYLVGFNLSPVLWRKLPGSRSAGRVQSVALRLICER
EAEIEAFRSREYWTIDAEFAAGERRLLARLHALDGKKLDKFALGSEDETKAVLGRLEALS
DWRVSDVERKQGRRNPAPPFTTSTLQQEASRKLGFSAKKTMQVAQKLYEGISLGRETVGL
ITYMRTDSVNLSNEAVAAIRDMVDQVNGPRYLPDRPRSFANKAKNAQEAHEAVRPTDVFR
RPKEIRSHLDDDQFRLYELIWKRTVASQMAAAILDQVAIEVTDGAKVATFRATGSVIAFD
GFLALYQEGRDDEEEDEEKRLPNFERAEPLDRGPLKSDQHFTEPPPRYTEATLVKKLEEL
GIGRPSTYASIISVLQDRNYVVLDKKRFVPEDRGWLVTAFLVSFFDRYVEYDFTARLENE
LDQVAEGEVDWKAVLRAFWDAFHMAIDGTSDLKISDVLTAVEARLESHVFPDKGDGSDPR
ACPACANGRLSLRLGKFGSFVACSNYPECKFTRPVGGAAGTGDGASEAGATGLDVGPKHL
GDDPATGLPVTLRKGPYGVYVQLGDGGKGEEKPKRASLPKGLTPEAVTLDIALGLLALPR
EIGQHPETGEMITAGIGRFGPYLKHNGAFKSLTPDDDVLTIGINRAVALLAEAPKGRGGS
VAPLRVLGEHPSGGEIALYKGRYGPYVKHGSVNATLPRAADPEALTLDEAVALVDARAAA
TGKKAKPAKKTSASKAKAEKPAAKATKASTAKAAPKRKAAAAAEPDEVPFDDAVPAKAAA
KTAAARKPAASKAAPKKAATPKAAAAKKPAPKKTAAKTSAAG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcgtcgtcgtcgaatcgcctgcgaaagccaagacgatcaacaagtatctcggc
gatgacttcaaggtcctcgcgagctacggccatgtcagcgatctgccggcaaaggacgga
tcggtgcgcccggatgaggacttcgcgatgacctacgaggtcgatccgaagtccgaacag
catctgaaggccatcgccagcgcgctcaagggcgccgatcagctcttcctcgccaccgac
cccgatcgcgagggcgaggcgatcagctggcatgtccacaatgccctgacccggcgcggc
gcgctcaagggcgtgcccgtcaagcgggtggtgttccacgagatcaccaaaagcgcggtg
cagaaggcgatcgccaatccgcgcgacatcgacatgaacctggtcaacgcccagcaggcg
cgccgggcgctggactatctggtcggcttcaacctgtcgccggtgctgtggcgcaagctg
cccggctcccgctcggccggccgcgtccagtcggtggcgctgcggctgatctgcgagcgc
gaggccgagatcgaggccttccgcagccgggaatactggacgatcgatgccgaattcgcc
gcaggcgagcgccggctgctcgcccggcttcacgcgctcgacggcaagaagctcgacaaa
ttcgcccttggttccgaggacgagaccaaggctgtgctgggccggctggaggcgctctcc
gactggcgcgtctccgatgtcgagcgcaagcagggccgccgcaacccggcgccccccttc
accacctcgaccctgcagcaggaagccagccgcaagctcggcttctcggccaaaaagacc
atgcaggtcgcccaaaagctttacgagggcatctcgctcggccgcgagaccgtcggtctg
atcacctatatgcgaaccgacagcgtcaacctgtcgaacgaggcggtggccgcgatccgc
gacatggtcgaccaggtcaacggcccccgctacctgcccgaccggccgcgcagcttcgcc
aacaaggccaagaacgcccaggaagcacatgaagccgtgcgcccgaccgacgtgttccgc
cggccgaaagaaatccgttcccatctcgacgacgatcagttccggctctacgagctgatc
tggaagcgcacggtggcgagccagatggcggcggcgatcctggatcaggtcgcgatcgag
gtgaccgatggtgcgaaggtcgcaaccttccgcgccaccggcagcgtcatcgccttcgac
ggcttcctggcgctctaccaggaaggccgcgacgacgaggaagaggacgaggaaaagcgt
ctgcccaatttcgagcgggccgaaccgctcgatcgcggcccgctgaaatccgaccagcat
ttcaccgagccgccgccgcgctataccgaggcgacgctggtgaagaagctggaggaactg
ggcatcggccgcccgtcgacctatgcctcgatcatctcggtgcttcaggaccgcaactat
gtggtgctggacaagaagcgcttcgtgccggaagaccgtggctggctggtcaccgccttc
ctggtcagcttcttcgaccgctatgtcgaatatgatttcaccgcccggctggagaacgaa
ctcgaccaggtggcagagggcgaggtggactggaaggccgtgctgcgcgccttctgggac
gccttccacatggcgatcgacggcaccagcgacctcaagatctccgatgtgctgacggcg
gtcgaggcgcggctcgaatcccatgtcttcccggacaagggcgacggcagcgatccgcgc
gcctgcccggcctgcgccaatggccggctgtcgctgcgcctcggcaagttcggctctttc
gtcgcctgctccaactatcccgagtgcaagttcacccggccggtcggcggtgccgccggc
accggcgacggggcatcggaagcgggtgccaccgggctggatgtcggccccaagcatctg
ggcgacgacccggcgacgggcctgcccgtcaccctgcgcaagggcccctatggcgtctat
gtccagctgggcgacggcggcaagggggaagaaaaacccaagcgcgcctcgctgcccaag
gggctgacgccagaggccgtcaccctcgacatcgccctcggcctgctggccctgccgcgc
gagatcggccaacatccggaaaccggcgagatgatcaccgccggcatcggccggttcggt
ccgtatctgaagcataacggcgccttcaaatcgcttacccccgacgacgatgttctgacc
atcggcatcaaccgggcggtcgccctgctcgccgaggcgcctaagggccgcggcggttcg
gtcgcgccgctgcgcgtgctgggcgaacatccctcgggcggcgagatcgcgctctacaag
ggccgctacgggccttacgtgaagcatggatcggtgaacgccaccctgccccgcgcggcc
gatcccgaggcgctgacgctggacgaggccgtggccctggtcgatgcccgcgcggccgcg
accggcaagaaggcaaagccggcgaagaagacgtccgcatcgaaggccaaggccgagaag
cccgcggccaaggcgacgaaggcatccaccgccaaggccgcccccaagcgcaaggccgcc
gcagcggccgagcccgacgaggtgcccttcgacgatgccgtgccggcgaaggcggctgcg
aagacggcagctgcgcgcaagccggctgcgagcaaggcggccccgaagaaggcagccacc
cccaaggcggccgctgcgaagaagcccgcgccgaagaagactgccgcgaagacgagtgcc
gccggctga
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