Tistrella mobilis: TMO_2989
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Entry
TMO_2989 CDS
T02128
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tmo
Tistrella mobilis
Pathway
tmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TMO_2989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_2989
Enzymes [BR:
tmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TMO_2989
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TMO_2989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
DZR
SH3_HelY
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AFK54827
UniProt:
I3TPY9
LinkDB
All DBs
Position
complement(3302916..3305120)
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AA seq
734 aa
AA seq
DB search
MAVLPLQTMGGPAGRRLDRLDYLVPPGTTLAPGDVVQVPLGPRTITGVVWGPGEGDLAAG
RLKPVTARRDCPPVPEALRRLVDAVAAYTVSPPAAVLRMVLPVDDALDPPRPETGLVATG
AAPAGRLTPQRRAVLETLEHVTAEEGGSPPTVAALAAAAGVSDGVVRGLIDGGALVPVDR
PVPRAFDLPDPDLPGPAFGPDQAAAAAALVAAVGAGFAVEVLDGVTGSGKTEVYFEAIAA
ALRQGRQALVLVPEIALTSQWLERFRGRFGAPPVVWHSNLGQAHRRRAWRAVAEGTAPVV
VGARSALFLPFPALGVIVVDEEHDAAFKQEDGVVYHARDMAVMRGALEGVPVVLASATPA
LETLANVERGRYRRRRLAARHGAAVLPAVEAIDMRAERLPATRFVSEPLKDAMLAAKERG
EQSMLFINRRGYAPLTLCRACGHRMRCPSCEAWLVEHRFRAGGPRLVCHHCGHEEPEPDT
CPACGAEHKFAPCGPGVERLAEEVGSLMPELRVAVMTSDTIASPVEAADLIARMEAGEID
VLIGTQMMAKGYHFPRLTVVGVVDADLGLAGGDLRAAERTYQLLAQVAGRAGRAEHPGRV
LLQTYDPGHPVIRALIAGDRDGFLDAEASERRAAGAPPYGRWAAVVVSAPDPGDARSTAD
VFARALRRTLPPGARLLGPAPAPISLLRGRHRVRLLVMADRAADLPAAMARARDLVPVRG
AVRVQIDVDPQSFL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtggccgttctgccgctgcagacgatgggcggcccggcggggcgccggctggaccggctg
gactatcttgtcccgcccggcacgacgctcgcccccggcgatgtggtgcaggtaccgctc
gggccgcgcacgatcaccggggtggtctggggccccggtgagggcgaccttgcggccggg
cggctgaaaccggtgacggcgcggcgcgactgcccgccggtgcccgaggcgctgcgccgg
ctggtggatgcagttgcggcctataccgtctcgccgcccgcggccgtgctgcgcatggtg
ctgccggtcgacgacgcgctggatccgccgcggccagagaccgggctggtggcgaccggt
gccgcgcccgcgggccggctgacgccccagcggcgggcggtgctggagacgctggagcat
gtgacggcggaagagggcggcagcccgccgacggtggcggcgctcgccgctgcggcaggc
gtgtccgatggcgtggttcgcgggctgatcgatggcggggcgctggtgccggtcgaccgg
ccggtgccgcgggccttcgatctgccggaccccgacctgcctggccccgcattcggcccc
gaccaggctgcggccgccgcggccctggttgcggcggtgggggcggggttcgcggtcgaa
gtgctggacggggtcaccggctccggcaagaccgaggtctatttcgaggcgatcgccgcc
gccctccgtcaggggcgccaggccctggttctggtgcccgaaatcgcgctgaccagccag
tggctggaacgctttcgcggccgcttcggcgcgccgccggtggtgtggcattccaatctg
gggcaggcccatcgccgccgcgcctggcgggcggtggcggaggggaccgctccggtggtg
gtgggggcgcgttcggcgctgttcctgccctttccggcgctgggcgtgatcgtggtcgac
gaggaacacgatgccgctttcaagcaggaggacggcgtcgtctatcacgcccgcgacatg
gcggtgatgcgcggcgcgctggaaggcgtgccggtggttctggcctcggcgacgccggcc
ctggaaacgctcgccaatgtcgagcgcggccgctatcgccgccgtcgcctggcggcccgc
cacggcgccgccgtgctgccggcggtggaggcgatcgatatgcgtgccgagcgcctgccc
gccacccgcttcgtttcggaaccgctgaaagacgccatgcttgccgcaaaggaacgcggc
gagcagtcgatgctgttcatcaatcgccggggctatgcgccgctcactttgtgccgtgcc
tgcgggcaccggatgcgctgcccgtcctgcgaggcctggctggtcgagcatcgcttccgt
gccggcggcccgcgcctggtttgtcatcattgcggccacgaggagcccgaacccgacacc
tgccccgcctgcggggccgaacacaaattcgccccctgcgggccgggcgtggaacgtctg
gccgaggaggtcggcagcctgatgcccgaattgcgggtggcggtgatgaccagcgacacc
atcgccagcccggtcgaggccgccgatctgatcgcgcgtatggaggcgggcgagatcgat
gtgctgatcggcacccagatgatggccaagggctatcactttccccggctgacggtggtg
ggggtggtggatgccgatctggggcttgccggcggcgatctgcgggcggccgagcggacc
tatcagctgctcgcccaggtcgccggccgggcggggcgggccgaacatccggggcgggtg
ctgctgcagacctatgatcccggccatccggtgatccgcgcgctcatcgccggtgatcgg
gacggtttcctcgacgcggaagcctcggagcgacgggccgcgggcgcgcccccttacggc
cgatgggcggcggtggtggtctcggcacccgatccgggcgatgcccgctccacggccgat
gtcttcgcacgcgcgctccgccggacactgccgcccggtgcccggctgctgggcccggca
ccggcgccgatcagcctgttgcggggccgccatcgggtgcggctgctggtgatggccgat
cgtgccgcggacctgcccgccgccatggcccgcgcccgcgatctcgtgccggtgcgcggt
gcggttcgtgtgcagatcgacgtcgatccgcagagttttctctga
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