Tistrella mobilis: TMO_3211
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Entry
TMO_3211 CDS
T02128
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tmo
Tistrella mobilis
Pathway
tmo03030
DNA replication
tmo03410
Base excision repair
tmo03420
Nucleotide excision repair
tmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TMO_3211 (polA)
03410 Base excision repair
TMO_3211 (polA)
03420 Nucleotide excision repair
TMO_3211 (polA)
03440 Homologous recombination
TMO_3211 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmo03032
]
TMO_3211 (polA)
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_3211 (polA)
Enzymes [BR:
tmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TMO_3211 (polA)
DNA replication proteins [BR:
tmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TMO_3211 (polA)
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
TMO_3211 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TMO_3211 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Baculo_E25
Motif
Other DBs
NCBI-ProteinID:
AFK55049
UniProt:
I3TQL1
LinkDB
All DBs
Position
3534664..3537480
Genome browser
AA seq
938 aa
AA seq
DB search
MSDQTPSPQSPLYLVDGSGYIFRAFHALPPLNRPDGTPVNAVYGFCSMLLKLIEDLKAER
LAVIFDAGRLSFRNEIYPDYKAHRPEPPEELVPQFPLIRDATRAFALPCIELPGYEADDL
IASYAKAAREAGQEVVIVSADKDLMQLIQDGVSLMDPMKAKKIGLEEVMAKFGVAPDKVV
DVQALAGDSTDNVPGVPGIGVKTAAQLIGEYGDLDTLLARAGEIKQPKRRQTLIDNADKA
RVSRELVRLRDDVELPDPLDSLHVGQMSAEVVLSFLEQQGFTSLVAKLRPHLGASKPAHG
GSSSSAAAAAAEDMRAAVRDYELIQDEPALAHWIEMATEAGIVGFDTETTSLDAHRAVLV
GFSLAVAPGRACYVPLRHVAPRKARQGALDLGAAGEAGADEGAPEQIPVDRAITLLRPLL
EAPGVLKVGQNIKYDMIVMAREGIEIAPIDDTMVMSYALDGTRHGHGMDELAQIHLGVTP
ISYDEVTGKGRDRIGFDEVPLDRARDYAAEDADVTLNLHRLLKPRLGPEGVRALYERTDR
ALVPVLARMERRGIRIDRDMLGKASREFADGMAALETRIHELAGESFNVGSPKQLGEILF
DKLSLPGGKKGKTGAYATGADILQKLAADGHELPAKVLDWRQLAKLKNTYADALAEAVNP
ETGRIHTSFALTVTTTGRLSSNDPNLQNIPVRTEEGRRIRRAFVPEAGHVLMSADYSQIE
LRLLADIANIQALRQAFREGIDIHALTASQVFGVPVQGMDPITRRRAKAINFGIIYGISA
FGLAQQLDIPQSEAKRYIEAYFERYPGIRDYMERAKADARAHGFVTTIFGRKCWTPDIAA
KNPALRAFAERAAINAPLQGSAADIVRLAMVALDEALEASPLGARMLLQVHDEILLEVPE
AEVEETAALVKRVMEDVVSRPVPYVVEVGTGLDWDAAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccagaccccgagcccccagagccccctctacctcgtcgacggatcgggctac
atcttccgggccttccacgccctgccgccgctgaaccgccccgacggcacgccggtcaac
gcggtctacggcttctgttcgatgctgctgaagctgatcgaggatctgaaggccgagcgg
ctggcggtgatcttcgatgccggccggctgagcttccgcaatgagatctaccccgactac
aaggcccatcgccccgagccgccggaagagctggtgccccagttcccgctgatccgcgac
gccacccgcgccttcgccctgccctgcatcgagctgcccggctatgaggccgacgacctg
atcgcgagctatgcgaaggccgcccgcgaggccggccaggaagtcgtgatcgtctcggcc
gacaaggacctcatgcagctgatccaggacggcgtctcgctgatggatcccatgaaggcc
aagaagatcggccttgaagaggtgatggccaaattcggcgtcgcccccgacaaggtggtc
gacgttcaggcgctggcgggcgattccaccgacaacgtgccgggcgtgcccggcatcggg
gtcaagaccgccgcccagctgatcggcgaatatggcgatctggacacgctgctcgcccgc
gcgggtgagatcaagcagcccaagcgtcgccagaccctgatcgacaatgccgacaaggcg
cgcgtctctcgtgagctggtccggctgcgcgatgatgtcgagctgcccgacccgctggac
agcctgcatgtcggccagatgagcgccgaggtcgtgctctccttcctggaacagcagggc
ttcacctcgctggtggccaagctgcggccgcatctgggcgcatcgaaacccgcccatggc
ggcagcagcagctcggccgccgcagcagcggccgaagacatgcgtgcggcggtgcgcgat
tacgagctgatccaggacgaacccgccctcgcccactggatcgagatggcgaccgaggcg
ggcatcgtcggtttcgacaccgagaccaccagcctcgacgcccatcgcgccgtgctggtc
ggcttttcgctggcggtggcgccgggccgggcctgctatgtgccgcttcgccatgtggcg
ccgcgcaaggcccggcagggtgcgctcgatctgggggccgccggcgaggccggggcggat
gagggcgcgcccgagcagatcccggtcgaccgggcgatcaccctgctccgcccgctgctg
gaagcgccgggcgtgctgaaggtcggccagaacatcaaatacgacatgatcgtcatggcg
cgcgaaggcatcgagatcgcgccgatcgacgacaccatggtcatgtcctacgcgctcgac
ggcacccgccacggccatggcatggacgagctggcccagatccatctgggggtgacgccg
atttcttatgacgaggtcaccggcaagggccgcgaccggatcggcttcgacgaggtgccg
ctggaccgcgcccgcgactatgccgccgaggacgccgacgtcacgctgaacctgcaccgg
ctgctgaagccgcgtcttggtcccgaaggcgtgcgggcgctttacgagcgcaccgaccgg
gcgctggttccagtgctggcgcggatggagcggcgcggcatccgcatcgaccgcgacatg
ctgggcaaggcctcgcgggaattcgccgacggcatggcggcgctggaaacgcgcatccac
gagctggccggggagagcttcaacgtcggcagccccaagcagctgggcgagattctgttc
gacaagctgagcctgcccgggggcaagaagggcaagaccggcgcctatgccaccggtgcc
gatatcctgcagaagctggccgccgacggccatgagctgccggcgaaggtgctggactgg
cgccagctcgccaagcttaagaacacctatgccgatgcgctggccgaggcggtgaacccg
gaaaccggccgcatccacaccagcttcgccctgaccgtcaccaccaccggccggctgtcg
tcgaacgaccccaatcttcagaacattcccgtgcgcaccgaggaaggccggcggatccgc
cgcgccttcgtgcccgaggcgggccatgtgctgatgtcggccgactacagccagatcgag
ctgcgcctgctggccgacatcgccaacatccaggccctgcgccaggccttccgcgagggc
atcgacatccatgcgctgaccgcctctcaggtcttcggcgtgccggtgcaggggatggat
ccgatcacccgccgccgggccaaggcgatcaatttcggcatcatctacggcatcagcgcc
ttcggtctggcccagcagctggacatcccgcaatccgaggccaagcgctatatcgaggcc
tatttcgagcgctatcccggcatccgcgactatatggagcgcgccaaggccgatgcccgc
gcccatggcttcgtgaccacgatcttcggccgcaaatgctggacgcccgacatcgccgcc
aagaacccggcactcagggcctttgccgagcgcgccgcgatcaacgcgccgcttcagggg
tcggccgccgatatcgtccggctcgccatggtggcgctggatgaggcgctggaggcaagc
ccgctcggcgcgcgcatgctgctccaggtccatgacgaaatcctgctggaggtgccggag
gccgaggtcgaagagaccgccgccctggtcaagcgggtgatggaagatgtggtgtcgagg
ccggtgccctatgtcgtcgaagtcggcaccgggctcgactgggatgccgcacattga
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