Tistrella mobilis: TMO_3212
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Entry
TMO_3212 CDS
T02128
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tmo
Tistrella mobilis
Pathway
tmo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TMO_3212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_3212
Enzymes [BR:
tmo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TMO_3212
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TMO_3212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AFK55050
UniProt:
I3TQL2
LinkDB
All DBs
Position
3537477..3538469
Genome browser
AA seq
330 aa
AA seq
DB search
MTAMPADSGAVEAVAPGRIRLPAGIDLVTAFAGLAAHGDDGLVRLDGDRLYTIERIERAP
VAVETILTPDARGDLQVTVETGAVDLLEIATRAIAARLHLPGAAFAALAADDPVIGRIAA
AQGVRPTLLYPEPMVVMLRTISAQLVNLAWAATTRRRLAEAFGIRRPVGSGWVIDIDPAR
IAAIDPDEIKTLQFTGAKARAIVSVARAIVDGRLDAAAMAAADTPEIRSRLTAISGIGDW
TADWVLARGLGRPVVATGDLGVRKAVARAYHDAEIIPAAEVARTTAHWGEAALDAQTLLL
STLGAAGAEGATPRLARKRAAVTSPEEKRP
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
ttgacggcgatgcctgcagatagcggagccgtcgaggcggtcgcccccggccggatccgg
ctgccggccggcatcgatctggtcaccgccttcgcgggcctcgccgcccatggcgatgac
gggctggtgcggctcgacggtgaccggctctatacgatcgagcggatcgaacgcgcgccg
gtggcggtggaaaccatcctcacccccgatgcccggggcgatttgcaggtgacggtggaa
accggcgccgtcgacctgctcgagatcgcgacccgcgccattgccgcccgtctgcatctg
ccgggtgcggccttcgcggcgcttgccgccgatgatccggtgatcggccggatcgccgcc
gcccagggggtgcgccccaccctgctctaccccgagcccatggtggtgatgctgcgcacg
atcagcgcccagctggtcaacctcgcctgggccgcgaccacccgccgtcgcctggccgaa
gccttcggcatccgccggccggtgggcagcggctgggtgatcgatatcgacccggcccgg
atcgcggcgatcgaccccgacgagatcaagaccctgcagttcaccggcgccaaggcccgg
gcgatcgtgagcgtggcacgggcgatcgtcgacggccggctggatgcagccgccatggcc
gcggccgacacgccggaaatccgcagccggctgaccgccatctcgggcatcggcgactgg
accgcagactgggttctggcccgcggcctgggccggccggtggtcgcgaccggtgatctg
ggcgtgcgcaaggccgtggcccgcgcctatcacgatgccgagatcattcccgcggccgag
gttgcccgcaccaccgcccattggggggaagccgccctcgacgcccagacgctgctgctc
tccaccctcggcgccgccggggccgagggcgccaccccgcggcttgcccgcaagcgggcc
gccgtcacctcgccggaggagaaacgcccatga
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