Tistrella mobilis: TMO_3242
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Entry
TMO_3242 CDS
T02128
Symbol
addA
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tmo
Tistrella mobilis
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_3242 (addA)
Enzymes [BR:
tmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TMO_3242 (addA)
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TMO_3242 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFK55080
UniProt:
I3TQP2
LinkDB
All DBs
Position
complement(3568213..3571704)
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AA seq
1163 aa
AA seq
DB search
MSREQAIAADPALSVWVGASAGTGKTKVLTDRVLRLMLAGAAPERILCITFTKAAAAEMA
LRLSGRLARWATADAGLLMEELITLLGRSPEAPELAAARRLFARLLDTPGGMNIQTIHSL
CQSLLRRFPLEAGLPPHFELMDERDAAELIAGARERLFAEAAGDAELGAAVDRLATLFDA
EAFAGLMTTVIGERHRLGRIVAAAGSLEAACRRVAAAHDLDPRATPESELAAACAPGGFD
EAGLKAAAEALVASSGKDDVVRGRALAGWLAAGEAERVTRFEDRLGATMTAERKPRARLM
VKATQEAAPAAFAALRREQDRMVELEDQRRAAATVAASVALLRVGHRLAELYDGQKRIRA
RLDYDDLILGAGRLLDTPGIAPWVLYKLDGGIMHLLLDEAQDTSPEQWKVVERLTEEFFA
GDGAVHEQAGSDADGLPLARTVFAVGDPKQSIYRFQRADPAGFKRMQAFFEARVTGAARG
WRPVELRQSFRSVRAVLDAVDAVFARQPAADGVVEPGRTLRHEAARIGQAGVVEVWPLAV
AEKPDPDDAWVAPVVREPQDDPMGRVADAIADTLRRWLDEGEMLEAQGRPIRAGDVLILV
QRRNAFVGRMARALKMAGVPVAGVDRMALIDQIAVADLVALGRALLLPEDDLTLAAVLKG
PIIGLDEAALYRAAVDRRTPEGRMPLIRALRERARGDDELRAAAGTLSTLARAADRMGPY
DFYADLLAARGGRQRLVARLGPEAEDAIDEFLNLALAFEQTEPPSLEGFLAWVGRSAVEV
KRDLEQGRDEVRIMTVHGAKGLQAPVVFLPDTIRLPRPPAGPVWLEDPAPMLLISPGSAD
VSDTVRDAQAVTAVEDRQEYRRLLYVAMTRAADRLYVCGWHGKTEAPADSWYALVQGALA
GMAAPVEMVLPGGIAGPGWRLTCPQDGAVERKAAEVAEPDVVTVGLPAALHPDRGVPPEP
VPSRPLAPSRPDDDPPPARSPLGDAGVRHFRRGRLVHRLLQVLPDLDPEARAGAARRFLA
APAHGLAPDEVEGLAAEVEAVLMHPDFAPIFGPGSRAEVPLGAVIGSRVVSGAVDRLLIS
ADRVLVVDYKTDRPPPSDPDRVARHYLRQMAAYRAVLRRIYPGRQVETALVWTDGPSLMH
LPDRLLDRWAPDPDPGDLLEHPG
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggaacaggcgatcgcggccgatccggccctgtcggtctgggtgggtgcctcg
gccggcaccggcaagaccaaggtgctgaccgaccgggtgctgcggctgatgctggccggg
gcggcacccgaacggatcctgtgcatcaccttcaccaaggcggctgcggcggagatggcg
cttcgcctgtcgggccgcctggcgcgctgggcgacggcggatgccgggctgctgatggag
gagttgatcactctgctcgggcgctctcccgaagctcctgaactcgccgcggcacggcgg
ctgttcgcgcggctgctcgacacgccgggcggtatgaacatccagaccattcattcgctc
tgccagtcgctgctgcggcgcttcccgctggaagccgggctgccgccgcatttcgaactg
atggacgagcgcgatgccgccgagctgatcgccggcgcccgcgagcggctgttcgccgag
gcggcgggcgatgccgaactgggggcggcggtcgaccggctggcgaccctgttcgatgcc
gaggccttcgccgggctgatgaccacggtgatcggcgaacgccaccggctgggccggatc
gtggccgcggcgggatcgctggaggccgcctgccgacgggtggcggcggcccatgacctc
gatccgcgggcgacgcccgaaagcgagctggcggccgcctgtgccccgggcggcttcgac
gaggcggggctcaaggccgcagccgaggccctggtcgcgtcgtccggcaaggacgatgtg
gtgcgcggccgggcgctggccggctggctggcggccggtgaggcggagcgcgtcacccgc
ttcgaggaccggctgggcgccaccatgaccgccgagcgcaagccgcgtgcccggctgatg
gtgaaggcgacccaggaagcggcgccagcggcctttgcggcgctccgccgcgaacaggac
cggatggtggagctggaggatcagcgccgcgcggctgcgacggtcgcggcctcggtggcg
ctgctccgggtggggcaccggctggcggaactgtatgacggacagaagcgcatccgggcg
cggctcgattatgacgatctgatcctgggggcggggcggttgctggatacgcccggcatc
gcgccctgggtgctctacaagctcgacggcggcatcatgcatctgctgctcgacgaggcc
caggacaccagccccgaacagtggaaggtcgtcgagcggctgaccgaagagtttttcgcc
ggcgacggtgcggtccacgagcaggcgggcagcgatgcggacggcctgccgctggcccgc
accgtgttcgccgtcggtgatccgaaacagtcgatctaccgcttccagcgcgcggacccg
gccggcttcaagcgcatgcaggcctttttcgaggcccgggtgaccggggctgcgcgcggg
tggcggccggtcgaactccgccagtccttccggtcggtccgcgcggtgctggatgcggtg
gatgcggtcttcgcccgccagccggcggccgacggcgtggtcgaacccggccggaccctc
aggcacgaggcggcccgcatcggtcaggccggggtggtggaagtctggccgctggcggtg
gccgaaaagccggacccggacgatgcctgggtggcgccggtggtgcgcgaaccccaggac
gatccgatgggccgggtggcagatgccatcgccgacacgctccgccgctggctggacgag
ggcgagatgctggaggcgcagggccggccgatccgggcgggcgatgtgctgattctggtc
cagcgccgcaacgccttcgtcggccggatggcccgggcgctgaagatggcgggcgtgccg
gtggcgggtgtcgaccgcatggcgctgatcgaccagatcgccgtggccgatctggtggcg
ctggggcgcgccctgctgctgcccgaggatgatctgaccctggcggcggtgctcaaggga
ccgatcatcggcctggacgaggcggcgctctaccgggcggcggtggatcgccgcacgccc
gagggacggatgccgctgatccgggccctgcgggagcgggcccgcggggatgacgagctt
cgcgccgcggccgggaccctgtcgacgctggcccgcgcggccgaccggatggggccttat
gatttctacgccgatctgctggcggcccggggtgggcggcagcggctggtggcgcggctt
ggtcccgaggccgaggatgcgatcgacgagttcctgaacctggcgcttgcctttgagcag
accgagccgccgagcctggaaggcttcctcgcctgggtcgggcgcagtgcggtggaggtc
aagcgcgaccttgagcagggccgcgacgaggtccggatcatgaccgtgcacggcgccaag
gggctgcaggcgccggtggtgttcctgcccgacacgatccgcctgccacgcccgccggca
gggccggtctggctggaggatccggcgccgatgctgctgatctcgcccggatcggcggat
gtctccgacacggtgcgcgacgcccaggcggtgacggcggtggaagaccggcaggaatac
cgccggttgctttacgtcgccatgacccgggcggccgaccggctgtatgtctgtggctgg
cacggcaagaccgaggcgcccgcggacagctggtatgccctggttcagggggcgttggca
gggatggcggcaccggtggagatggtgctgccgggcggtattgccggccccggctggcgg
ctcacctgcccgcaggatggcgctgttgagcggaaagccgccgaggtggcggaacccgac
gtcgtgacggtcggcctgccggcggcactgcatcccgatcggggggtaccgcccgaaccg
gtgccgtcgcgaccgctggcgccgtcgcgtcccgatgacgacccgccgcccgcccgatcg
ccgctgggcgacgccggcgtgcgccatttccggcgcggccggctggtgcatcgcctgctg
caggtgctgccggatctggatccggaagcccgcgccggggccgcccgccgcttcctggcc
gcccccgcccatggcctggcacccgacgaggtcgagggactggccgcagaggtggaggcg
gtgctgatgcacccggatttcgcgccgatcttcgggccgggctcgcgtgccgaggtgccg
ctgggtgccgtgatcggatcccgcgtggtttccggcgcggtcgaccggctgctgatttct
gccgaccgcgtgctggtggtggactacaagaccgaccggccgccgccatccgatccggac
agggtggcccggcactacctgcgccagatggccgcctatcgtgcggtgctgcgccggatc
tatcccggccggcaggtggagacggcgctggtctggaccgacgggccgtcgctgatgcac
ctgccggaccgcctgctcgaccgctgggccccggatccggatcccggcgatcttctggaa
caccctggttga
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