Tistrella mobilis: TMO_3400
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Entry
TMO_3400 CDS
T02128
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit and related 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tmo
Tistrella mobilis
Pathway
tmo03030
DNA replication
tmo03430
Mismatch repair
tmo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TMO_3400 (dnaQ)
03430 Mismatch repair
TMO_3400 (dnaQ)
03440 Homologous recombination
TMO_3400 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmo03032
]
TMO_3400 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_3400 (dnaQ)
Enzymes [BR:
tmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TMO_3400 (dnaQ)
DNA replication proteins [BR:
tmo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TMO_3400 (dnaQ)
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TMO_3400 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AFK55238
UniProt:
I3TR50
LinkDB
All DBs
Position
complement(3735046..3735732)
Genome browser
AA seq
228 aa
AA seq
DB search
MREIAFDTETTGFDPATGDRLVEIGCVEILDQARTGAEFHVYINPERDVPEAAVAVHGLT
AERLKTEPVFAEVADRFLDFVGDAPLVAHNAAFDMRFINAELTRLGRQPIPMSRSIDTVQ
MARIRFPGAPASLDALCRRFGVDNSNRLLHGALLDAQLLAEVYLHLLGDRQRGFDLAADR
RGGPGETDGRRRTVARPPRVHTPTPAELEAHQAFILKEVKAAIWLAED
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgagatcgccttcgacaccgaaaccaccggcttcgaccccgccaccggcgaccgg
ctggtcgaaatcggctgcgtcgagatcctggatcaggcgcgcaccggtgccgaattccat
gtctatatcaaccccgagcgcgacgtgcccgaggcggcggtggcggtgcacgggctgacg
gccgagcgcctgaagaccgagccggtcttcgccgaggtcgccgaccgctttctggacttc
gtgggcgatgcgccgctggtggcgcataacgccgccttcgacatgcgcttcatcaatgcc
gagctgaccaggctggggcgccagcccatcccgatgtcgcggtcgatcgacaccgtgcag
atggcccgcatccgctttccgggcgcgccggccagcctggacgcgctttgccgccggttc
ggggtcgacaacagcaaccgcctgctgcacggcgcgctgctcgacgcccagctgctggcc
gaggtctatctgcaccttctgggcgaccgccagcgcggtttcgacctggccgccgaccgt
cggggcgggccgggcgagaccgacggccgccgccgcacggtcgcccggccgccccgggtc
cacacccccaccccggccgagctggaggcccatcaggccttcatcctgaaggaggtcaag
gcggcgatctggctggcggaggattga
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