Tistrella mobilis: TMO_3561
Help
Entry
TMO_3561 CDS
T02128
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tmo
Tistrella mobilis
Pathway
tmo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TMO_3561 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_3561 (mutM)
Enzymes [BR:
tmo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TMO_3561 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TMO_3561 (mutM)
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TMO_3561 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AFK55399
UniProt:
I3TRL1
LinkDB
All DBs
Position
3915740..3916603
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVETVLRGIAPRMIGRRLAEVEARRPDLRRPLPAGFVQRLTGRAVIAADRRAKYL
RLHLEGGETLIVHLGMSGRLVIEDAPPPVAFHHGPSIAVADAPHTHVVFRLDDGTRILFA
DPRRFGLMDIAATDDLDAHDLFAHLGPEPLGNGFSGPYLARAFEGRRAPVKALLLDQRVV
VGVGNIYASESLFEAGIHPARAAGTLSAEDCDRLAAAVRATLDRAITAGGSTLRDFVGAS
GELGYFQHSFRVYDRADAPCSREGCGGTIERVVQSNRATYFCSRCQA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccagagctgcccgaagtcgaaaccgtgctcaggggcatcgcccccaggatgatcgga
cgccgccttgccgaggtcgaggcgcggcgcccggatctgcgtcgcccgctgcccgccggt
ttcgtgcagcggctgacggggcgtgccgtgatcgcggcggatcgtcgcgccaaatatctg
cgcctgcaccttgaggggggcgagacgctgatcgtccatctgggcatgtcgggccggctg
gtgatcgaggatgcgccgccgccggtcgccttccatcacggcccctcgatcgcggtggcg
gatgcgccccatacccatgtcgtgtttcgcctggacgatggcacccggatcctgttcgcc
gatccgcgccgcttcgggctgatggacatcgccgccaccgacgatctggacgcccatgac
ctcttcgcccatctgggaccggagccgctcggcaacggtttctcggggccctatctcgcc
cgggccttcgaggggcggcgtgccccggtgaaggcgctgctgctggatcagcgcgtggtg
gtgggggtcggcaacatctatgcgagcgaaagcctgttcgaggccggcatccacccggcc
cgtgccgccggcaccctgtcggccgaggattgcgaccggctggcggcggcggttcgggcg
acgctcgaccgggcgatcaccgccggcggctccaccctcagggatttcgtcggcgcctcg
ggcgaactcggctacttccagcacagtttccgggtctatgaccgggccgacgccccctgt
tcgcgggagggctgcggcggtaccatagaacgcgtcgttcaatcgaaccgtgccacctat
ttctgttcccggtgtcaggcatga
DBGET
integrated database retrieval system
