Tistrella mobilis: TMO_c0110
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Entry
TMO_c0110 CDS
T02128
Symbol
carB
Name
(GenBank) Carbamoylphosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
tmo
Tistrella mobilis
Pathway
tmo00220
Arginine biosynthesis
tmo00240
Pyrimidine metabolism
tmo00250
Alanine, aspartate and glutamate metabolism
tmo01100
Metabolic pathways
tmo01110
Biosynthesis of secondary metabolites
tmo01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
TMO_c0110 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TMO_c0110 (carB)
00220 Arginine biosynthesis
TMO_c0110 (carB)
Enzymes [BR:
tmo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
TMO_c0110 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp_2
B12-binding
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AFK56720
UniProt:
I3TVD2
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All DBs
Position
pTM3:109955..113200
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AA seq
1081 aa
AA seq
DB search
MPKRTDIKSILVIGAGPIVIGQACEFDYSGTQACKALREEGYRIILVNSNPATIMTDPGL
ADATYVEPITPELVAKVIEAERPDALLPTMGGQTALNTALALSRDGTLKKFGVELIGANE
AAIEKAEDRQLFREAMDRIGLSSPRSRVVRDMESAREAMEFVGLPTIIRPSYTLGGTGGG
IAYNRQEFEEIVASGLDASPVNEVLVEESVLGWKEYEMEVVRDRADNCIIVCSIENIDPM
GVHTGDSITVAPALTLTDKEYQIMRDASLAVLREIGVDTGGSNVQFAIDPETGRMVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEVQNDITGVTPASFEPTIDYVVTKIPR
FAFEKFPGTARTLSTSMKAVGEVMAMGRCFEESLQKALRSMETGLTGLDEIEVAGGAGTS
EVDALRSALALPTPDRLLVIAQALRAGLTPEEIHEASDYDPWFIERLAGLVATEKQVIED
GLPADAAGWRRLKSLGFSDARLATLAGLDEEIVRARRWKAGVHPVFKRVDTCAAEFEART
PYMYSTYELPGFDGIVECEAQPSDRTKIIVLGGGPNRIGQGIEFDYCCVHAAYALSEAGY
ETIMVNCNPETVSTDYDTSDRLYFEPLTVEDVLELVRVETSRGTLKGVIVQYGGQTPLKL
AEPLEKAQVPILGTSPDAIDLAEDRRRFQKLLNDLDLKQPANDTCHSEEEALAIAQRIGF
PLVARPSYVLGGRAMEIVHDLGGLSSYMRRAVREFGNKPVLLDRFLTDAIEVDVDALCDG
ETVVVAGIMEHIEEAGVHSGDSACTLPPYSLDDEIIAEIRRQTEALALKLGVVGLMNVQF
AVKDREIYILEVNPRASRTVPFVAKAVGRPIAKIAARIMAGEKLGAFDLAERKVDHIAVK
EAVFPFARFPGVDILLGPEMKSTGEVMGLDTDFGRSFAKAQLAAGVRLPTSGRVFVSVRD
DDKDAMVEIARGLKAQGFEIVATRGTARVLADAGIQVELVKKAHEGRPNIIDQIKDRRID
MVFNTTAGSQAISDSYSLRRETLMNKVPYFTTVAGCRATVQAIAAIRAGTLEVRSLQSYS
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcgtaccgatatcaagtcgatcctggtgatcggcgcaggccccatcgtcatc
ggtcaggcctgcgaattcgactattcgggcacccaggcctgcaaggcgctgcgcgaagag
ggctaccggatcatcctggtcaactccaacccggccacgatcatgaccgatccgggcctg
gcggatgcgacctatgtcgagccgatcacgcccgaactggtcgccaaggtgatcgaggcc
gagcgccccgacgccctgctgccgaccatgggcggccagaccgcgctcaacaccgcgctc
gctctgtcgcgcgacggcacgctgaagaagttcggcgtcgagctgatcggcgccaacgag
gcggcgatcgaaaaggccgaagaccgccagctgttccgcgaggcgatggaccgcatcggt
ctgtccagcccgcgcagccgcgtggtccgcgacatggaatccgcccgcgaggcgatggag
ttcgtcggcctgccgacgatcatccgcccctcctatacgctgggcggcaccggcggcggc
atcgcctataaccggcaggaattcgaagagatcgtggccagcggcctcgacgcctcgccg
gtgaacgaggtgctggtcgaggaatcggtgctcggctggaaggaatacgagatggaggtg
gtccgcgaccgtgcggacaactgcatcatcgtctgctcgatcgagaacatcgacccgatg
ggcgtgcacaccggcgacagcatcaccgtcgcaccggcactcacgctcaccgacaaggaa
taccagatcatgcgtgacgcctcgctcgcggttctccgcgagatcggcgtcgacaccggc
gggtcgaacgtgcagttcgcgatcgaccccgagaccggccgcatggtcgtgatcgagatg
aacccgcgcgtgtcgcgctcctcggcgctcgcctcgaaggcgaccggcttcccgatcgcc
aaggtcgcggccaagctcgccgtcggctacacgctcgacgaggttcagaacgacatcacc
ggcgtcacgccggcctcgttcgagccgaccatcgactatgtcgtgaccaagatcccgcgc
ttcgccttcgagaaattcccgggcaccgcgcgcacgctgtcgacctcgatgaaggcggtg
ggcgaggtcatggccatgggccgctgcttcgaggaatcgctgcagaaggcgctccgctcg
atggagacgggcctgaccggcctcgacgagatcgaggtcgcgggcggcgccggcaccagc
gaggtcgatgcgctccgctcggcgctggccctgccgaccccggatcgtctgctggtcatc
gcccaggcgctgcgcgccgggctgaccccggaagagatccacgaggcctcggattacgat
ccctggttcatcgagcgtctggccggtctggtcgccaccgaaaagcaggtgatcgaggac
gggctgccggcggatgcggccggctggcggcggctgaagtcgctgggcttctcggatgca
cggctggcgacgctcgccggtctcgacgaagagatcgtccgtgcccggcgctggaaggcc
ggcgtgcacccggtgttcaagcgggtcgacacctgcgccgccgaattcgaggcgcgcacc
ccctacatgtactcgacctacgagctgcccggcttcgacggcatcgtcgaatgcgaggcg
cagccctcggatcgcaccaagatcatcgtgctcggcggcggtccgaaccggatcggccag
ggcatcgagttcgactattgctgtgtccacgcggcctatgccctctcggaagcgggctac
gagaccatcatggtcaactgcaaccccgagacggtctccaccgactacgacacctcggac
cggctttatttcgagccgctgacggtcgaggacgtgctggagctggtgcgggtggaaacc
tcgcgcggcacgctcaagggcgtgatcgtccagtatggcggccagaccccgctgaagctg
gccgagccgctggagaaggcccaggtgccgatcctcggcacctcgccggatgcgatcgac
ctggccgaggatcgtcgccgcttccagaagctgctgaacgatctggatctgaagcagccg
gccaacgacacctgccacagcgaggaagaggcgctggccatcgcccagcgcatcggcttc
ccgctggtcgcgcgcccgtcctatgtgctgggcggccgggcgatggagatcgtccatgat
ctgggcgggctgtcttcgtatatgcgccgggcggtgcgcgagttcggcaacaagccggtg
ctgctcgaccgcttcctgaccgatgccatcgaggtggatgtcgacgcgctctgcgacggc
gagaccgtggtggtcgcgggcatcatggagcatatcgaagaggccggcgtccattcgggc
gacagcgcctgcaccctgccgccctattctctcgacgacgagatcatcgccgagatccgc
cggcagaccgaggcgctggcgctcaagctgggcgtggtcgggctcatgaacgtgcagttc
gcggtcaaggaccgggagatctacatcctggaggtcaacccgcgcgccagccgcaccgtg
cccttcgtcgccaaggccgtcggccggccgatcgccaagatcgcggcccggatcatggcg
ggcgagaaactgggcgccttcgatctggccgagcgcaaggtcgaccatatcgcggtcaag
gaagcggtcttccccttcgcccgcttccccggcgtcgacatcctgctcgggcccgagatg
aagtcgaccggcgaggtcatgggcctggataccgatttcggccgcagcttcgccaaggcg
cagctggcggcgggcgtgcgcctgccgacctcgggccgggtcttcgtctcggtgcgcgac
gacgacaaggacgcgatggtagagatcgcccgcggcctgaaggcccagggcttcgagatc
gtcgccacccgcggcaccgccagggtgctggccgatgcgggcatccaggtcgaactggtc
aagaaggcccatgagggccggccgaacatcatcgaccagatcaaggaccgccggatcgac
atggtgttcaacaccaccgccgggtctcaggcgatttcggacagctactcgctgcgccgc
gaaaccctgatgaacaaggtgccctatttcaccaccgtcgccggttgccgggcgaccgtt
caggcgatcgcggccatccgggccggcacgcttgaagtccggtccctgcaatcctattct
gcctga
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