Tistrella mobilis: TMO_c0125
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Entry
TMO_c0125 CDS
T02128
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tmo
Tistrella mobilis
Pathway
tmo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TMO_c0125 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_c0125 (uvrB)
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TMO_c0125 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TMO_c0125 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_16
AAA_22
UB2H
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AFK56735
UniProt:
I3TVE7
LinkDB
All DBs
Position
pTM3:129371..131581
Genome browser
AA seq
736 aa
AA seq
DB search
MPVLMPGRTFDDREVPDPMPTRPTGRADFNLVSAFEPAGDQPTAIAELLDGIRGQERDQV
LLGVTGSGKTFTMAQVIAAEGRPALILAPNKTLAAQLYGEMKQFFPENAVEYFVSYYDYY
QPEAYVPRSDTYIEKEASINEQIDRMRHSATRALLERRDVVIVASVSCIYGIGAVETYAR
MTLDIRKGETIDRTVLLKKLVELQYRRNDAGFQRGAFRVRGDVVEIFPAHLEDRAWRLSL
FGDEVEAIVEFDPLTGEKTGSFPKVRIYPNSHYVTPKPTLAQAVKHIKEELKARLAQFEA
EGKLLEAQRLEQRTTFDMEMIEATGSCAGIENYSRYLSGRAPGEPPPTLFEYLPEDAILF
VDESHVTVPQVGGMFRGDFQRKSVLSDYGFRLPSCADNRPLKFEEWDAMRPQSVFVSATP
GPWELERTGGTFVEQVIRPTGLIDPPVIVRPCTRQVDDLLAEARDTIAKGYRVLVTTLTK
RMAEDLTEYMHEAGLKVRYLHSDVETLERIEIIRDLRKGVFDILIGINLLREGLDIPECA
LVAILDADKEGFLRSKTSLVQTIGRAARNVDGRVLCYADHMTESLSYAIAETDRRRAKQM
AYNQEHGITPESVRKTIGDALGSVYEADYLEVEVEEADQGHLVGHNLRAYKEDLEKRMRA
AAADLEFEEAARLRDELKRLDAAELGLAEGAGPALAPPKGRGGRLDSRAARVAGGAKTGG
RRGALKSGKPTGRKRG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcctgatgcccggccgcaccttcgacgaccgcgaggtcccggatccgatgccg
acccgtccgacgggccgggcagatttcaatctggtcagcgctttcgagccggccggcgac
cagccgaccgcgatcgcggaactgctcgacggcatccgcggccaggaacgcgatcaggtg
ctgctgggcgtcaccggctcgggcaagaccttcaccatggcccaggtgatcgccgccgag
ggccgcccggccctgatccttgcgccgaacaagacgctggccgcgcagctttatggcgag
atgaagcagttcttccccgagaacgcggtggaatatttcgtctcgtattacgactactat
cagcccgaagcctatgtgccgcgctccgatacctatatcgagaaggaagcctcgatcaac
gagcagatcgaccggatgcgccattcggccacccgcgccctgctggagcggcgcgatgtg
gtgatcgtggcctccgtgtcgtgcatctacggtatcggcgcggtcgaaacctatgcccgg
atgacgctggatatcaggaagggcgagacgatcgaccggacggtcctgctgaagaagctg
gtcgagctgcaatatcgccgcaacgatgccggctttcagcgtggtgccttccgggtgcgc
ggcgatgtggtcgagatcttccccgcccatctggaagaccgcgcctggcggctgagcctg
ttcggcgacgaggtcgaggcgatcgtcgaattcgacccgctgaccggcgagaagaccggc
agtttccccaaggtgcgtatctatcccaacagccattatgtgacgcccaagccgacgctg
gcccaggcagtcaagcacatcaaggaagagctgaaggcgaggctcgcccagttcgaggcc
gagggcaagctgctggaggcccagcggctggaacagcgtaccaccttcgacatggagatg
atcgaggcgaccggttcctgcgccggcatcgagaactattcccgctatctgtctggccgg
gcccccggcgagccgccgccgaccctgttcgaatacctgccggaggatgccatcctcttc
gtcgacgagagccatgtgaccgtgccgcaggtgggcggcatgttccgtggcgactttcag
cgcaaatcggtgctgtcggattacggcttccgcctgccctcctgcgccgacaaccggccg
ctgaaattcgaggaatgggacgcgatgcggccgcaatcggtgttcgtgtcggcgaccccc
ggcccctgggagctggagcgcaccggcggcaccttcgtcgaacaggtcatccgtcccacc
gggctgatcgatccgccggtgatcgtgcggccctgcacccgccaggtggacgatcttctg
gccgaggcgcgcgataccatcgcgaagggctaccgggtgctggtcaccacgctgaccaag
cgcatggccgaggatctgaccgaatacatgcacgaggccggactgaaggtccgctatctg
cattccgacgtcgagacgctggagcggatcgagatcatccgcgatctgcgcaagggcgtg
ttcgacatcctgatcggcatcaacctgctgcgcgaggggctggacatcccggaatgcgcg
ctggtcgccattctggatgccgacaaggaaggcttcctgcgctccaagacctctctggtc
cagaccatcggccgcgcggcacgcaatgtcgacggccgggtgctctgctatgccgaccac
atgaccgaaagcctgtcctacgccattgccgagaccgaccgccgccgcgccaagcagatg
gcctataaccaggaacacggcatcacgcccgaaagcgtgcgcaagaccatcggcgatgcg
ctgggcagcgtctacgaggcggactatctggaagtcgaggtcgaagaggccgatcagggc
catctggtcggccacaacctccgcgcctacaaggaggacctggagaagcggatgcgcgcc
gccgctgccgatctggagttcgaggaggcggcccggctgcgcgacgagctgaagcgcctg
gatgctgccgaactgggcctggccgagggggccggcccggcgctcgccccgcccaaaggg
cgcggcggccggctggactcgcgggcggcccgggtcgcgggcggcgccaagaccggcggc
cggcgcggcgcgctcaaatccggcaagcccaccgggcgcaagcgcggttga
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