Tistrella mobilis: TMO_c0185
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Entry
TMO_c0185 CDS
T02128
Symbol
uvrD
Name
(GenBank) UvrD/REP helicase domain protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tmo
Tistrella mobilis
Pathway
tmo03420
Nucleotide excision repair
tmo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TMO_c0185 (uvrD)
03430 Mismatch repair
TMO_c0185 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_c0185 (uvrD)
Enzymes [BR:
tmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TMO_c0185 (uvrD)
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TMO_c0185 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TMO_c0185 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFK56795
UniProt:
I3TVK7
LinkDB
All DBs
Position
pTM3:complement(196559..198952)
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AA seq
797 aa
AA seq
DB search
MSDPFSLPEASVPQHPARGAGASHAHAYLDGLNAEQRAAVEALDGPVLVLAGAGTGKTRV
LTTRLAHLVDTGRARPWQILAVTFTNKAAREMRERVGRLIGAEESGLWFGTFHSLCARIL
RRHAELVGLTSTFTILDTDDQVRLAKQVIQAAGVDEKRWPPKVLVGAIQRWKDKGWQPGQ
VPGAEAHEVARGRGADLYAAYQKRLKELNAADFGDLLMECIRLFREHPDVLADWQRRFRY
ILVDEYQDTNVAQYLWLRLLAQAHHNICCVGDDDQSIYSWRGAEVGNILRFEKDFPEATV
IRLERNYRSTGHILAAAGAVIANNEERLGKTLWTDDGEGEKVRVQGCWDGDEEARFVSDV
IEHLRAQGMSLSDMAVLVRAGHQTRAFEDRFVTIGMPYRVVGGLRFFERAEVRDALAYMR
LIITPADDLAFERVVNVPKRGLGDTSVQAVAVAARAAGLPMLVAAADPVVVGGLRPKARA
ALADFTRMIAGWREALSHEPHGEVVRQMLDESGLTGMWQTEKTPEAQGRLDNLKELVRTV
EEFDSLPAFLEHVSLVMDTDTRAGEDMVSIMTLHGAKGLEFDTVFLPGWEEGVFPHERAL
EESGRDGLEEERRLAYVGITRARRRAVISFAANRRVYNQWLSAVPSRFVEELPAEHVELS
GQTGVYGGNRAAGWQPAGRRADPYAQTSPYAQTEVYDRATRLADDVTARTIDGTAVRVER
GGMSVAPRRPGPASGRTPGQAAAAARAADTSSFKIGMRVSHAKYGTGFIERIEGDKLQVV
FDGVGRKKVIDRFVEPV
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatccgttcagcctgccggaagcctcggtgccgcagcatcccgcgcgcggcgcc
ggtgcgtcccatgcccatgcctatctcgacgggctgaatgccgagcagcgggcggcggtg
gaggcgctggacgggccggttctggtgctggccggcgccggcaccggcaagacccgggtg
ctgaccacaaggttggcgcatctggtggataccggccgcgcccggccctggcagatcctg
gcggtcaccttcaccaacaaggccgcgcgcgaaatgcgcgagcgggtggggcggctgatc
ggcgcggaagaaagcgggctctggttcggcaccttccactcgctgtgtgcccgcattctg
cgccggcacgccgagctggtcgggctcacctccaccttcaccattctcgataccgatgat
caggtgcggctggcgaagcaggtgatccaggcggccggcgtcgacgagaagcgctggccg
cccaaggtgctggtgggcgccatccagcgctggaaggacaagggctggcagccgggccag
gtgccgggggccgaggcgcatgaggtggcgcgcggccgtggtgccgatctctacgccgcc
tatcagaaacggctgaaagagctgaacgcggccgatttcggcgatctgctgatggaatgc
atccggctgttccgcgagcatcccgacgtgctggccgactggcagcgccgcttccgctac
atcctggtcgacgagtatcaggacaccaacgtcgcccagtatctgtggctgcgcctgctg
gcccaggcccatcacaacatctgctgcgtgggcgacgacgaccagtcgatctattcctgg
cgcggtgccgaggtcggcaacatcctgcgcttcgaaaaggattttcccgaggcgacggtg
atccggctggagcgcaattaccgctccaccggccatatcctggccgccgccggcgccgtg
atcgccaacaatgaagagcggctgggcaagacgctctggaccgatgacggcgagggcgag
aaggtccgggtccagggctgctgggatggcgacgaggaagcccgcttcgtctcggacgtg
atcgaacatctgcgcgcccagggcatgtcgctttccgacatggcggtgctggtccgcgcc
ggccatcagacccgcgctttcgaagaccgcttcgtgaccatcggcatgccctatcgggtg
gtcgggggcctgcgcttcttcgagcgcgccgaggtgcgcgacgcgctcgcctatatgcgc
ctgatcatcacgcccgccgacgatctggccttcgagcgggtggtgaacgtgccgaagcgc
gggctgggcgacacctcggttcaggccgtggcggtggcggcacgggcggcggggctgccg
atgctggtggccgcggccgatccggtggtggtgggcgggctgcggcccaaggcgcgcgcg
gcactggccgatttcacccgcatgatcgccggctggcgcgaggcgctgtcgcacgagcct
catggcgaggtggtccggcagatgctggatgaaagcgggctgaccggcatgtggcagacc
gagaagacgcccgaggcccagggccggctcgacaacctgaaggagctggtgcgcacggtc
gaggaattcgacagcctgccggctttcctcgaacatgtctcgctggtgatggacaccgat
acccgcgcaggcgaggacatggtcagcatcatgaccctgcacggcgccaagggcctggaa
ttcgacaccgtctttctgccgggctgggaggagggcgtcttcccccatgaacgcgcgctg
gaggaaagcggccgcgacgggctggaagaggaacgccggctggcctatgtgggcatcacc
cgcgcccgccgccgggcggtgatcagcttcgcggccaatcgccgggtctacaaccagtgg
ctgtcggccgttccctcgcgcttcgtggaagaactgccggccgagcatgtcgaactctcg
ggccagaccggggtctatggcggcaaccgcgccgccggctggcagccggccgggcggcgt
gccgacccatacgcccagaccagcccctatgcccagaccgaagtctatgaccgcgcgacc
cggctggccgacgacgtcaccgcccggaccatcgacggcaccgcggtcagggtggaacgg
ggcggcatgtcggtggcgccccggcgccccggtcccgccagcggccgcaccccgggacag
gcggccgcggcggccagggccgccgatacctcgtccttcaagatcggcatgcgggtgtcg
catgccaaatatggcaccggcttcatcgaacgcatcgaaggcgacaagctgcaggtggtg
ttcgacggggtcggccggaagaaagtgatcgatcgctttgtcgagcccgtctga
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