Tistrella mobilis: TMO_c0440
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Entry
TMO_c0440 CDS
T02128
Symbol
sbcD
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tmo
Tistrella mobilis
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmo03400
]
TMO_c0440 (sbcD)
DNA repair and recombination proteins [BR:
tmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TMO_c0440 (sbcD)
Archaeal homologous recombinant proteins
TMO_c0440 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AFK57050
UniProt:
I3TWB2
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All DBs
Position
pTM3:478813..480060
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AA seq
415 aa
AA seq
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MRILHTADWHLGQELHGFDRGAEHDRFLVWLLDTLDEDAIDALVVAGDVYDTVNPPVAAQ
QRLYRFLNTALARRPGLDIVIVGGNHDGPSRLELPAPLLDRSRISIFGALPRSDGRPDPA
RTLVPLTDEAGQVAAVVAAIAYPRPGDLPVDGGGAAALAAIYAEALAAARERFPGLPVIA
TGHLHVTGGDVSAESERPVMIGGEEALSPDLFPEGYAYVALGHLHRAQGLKAAMPLRYAG
APFPMSMAERSYRHSVVLVETDGCGPATHRLIPVPRPVAFLRVPETGALDPEAALAAVAA
LDIAPPESPDLRPYLEVVVAIDAPVPDLRRRVAEALGDTPVRLARVRSLSRGSGGSLADG
ASLPPALDEIDPADVFARLHRQRFDTDPPDALARAFAELLADAHAGPDTDAGETA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctccacaccgccgactggcatctgggtcaggagctgcacggtttcgaccgc
ggcgccgagcacgaccgtttcctcgtctggctgctcgacacgctggacgaagacgcgatc
gatgcgctggtggtggcgggcgatgtctacgacacggtcaacccgccggtcgccgcccag
cagcggctctaccgcttcctgaacaccgccctggcccgccggcccgggctcgacatcgtg
atcgtcggcggcaatcacgacgggcccagccggctggaactgccggcgccactgctcgac
cggtcgcggatctcgattttcggcgccctgccccgcagcgacggccggcccgatcccgcc
cgcacgctggtgccgctcaccgatgaagccggacaggtggccgccgtggtcgccgccatc
gcctatccccgcccgggggatctgccggtcgacggcggcggtgccgcggcgctggccgcg
atctatgccgaggctctcgccgccgcccgcgagcgcttccccggcctgccggtgatcgcg
accggccatctccacgtcaccggcggcgacgtttcggccgaaagcgaacggccggtgatg
atcggcggcgaggaggcgctgtcgcccgacctcttccccgagggctatgcctatgtcgcc
ctcggccatctgcaccgcgcccaggggctgaaagccgccatgccgctgcgctatgccggc
gcccccttcccgatgtcgatggcggaacgcagctaccgccattcggtggtgctggtcgaa
accgacgggtgcggccccgcaacccaccggctgatcccggtgccgcgcccggtcgccttt
ctgcgcgtgcccgaaaccggggcgctcgaccccgaggcggcgctcgccgcggtcgcagcc
ctcgacatcgccccacccgaaagccccgatctccgcccctatctggaggtcgtggtcgcg
atcgacgcccccgtccccgatctccgccgccgggtcgccgaggcgctgggcgatacgccg
gtgcgccttgcccgggtgcgttcgctcagccgcggcagcggcggcagcctcgccgacggc
gccagcctgccgcccgccctcgacgagatcgatccggccgacgtcttcgcccggctgcac
cgccagcgtttcgataccgacccgcccgacgcactggcccgcgccttcgccgaactgctc
gccgacgcccatgccggccccgacaccgatgccggggagaccgcctga
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