Tistrella mobilis: TMO_c0697
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Entry
TMO_c0697 CDS
T02128
Symbol
rhiR
Name
(GenBank) LuxR family transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
tmo
Tistrella mobilis
Pathway
tmo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TMO_c0697 (rhiR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmo03000
]
TMO_c0697 (rhiR)
Transcription factors [BR:
tmo03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
TMO_c0697 (rhiR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AFK57307
UniProt:
I3TX19
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All DBs
Position
pTM3:830445..831188
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AA seq
247 aa
AA seq
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MTQDRIIHDQGRDAFDFIDAVSDLHDPDEIIARFHRAVARYGYATFIITGLPGLTEPFET
RVLTRHWPDAWFRIYTAETYILDDPVGWHCRVAPAPFAWSEAPFDPGRQPRSRRIMEEAA
SFGMKDGLCVPVHGLQGLDWCVSLGGPDPDLSPRARAAVHLMALYAFDGLRRRLLSPDTP
PPRRLTAREREVIAWTAAGKSAWEASCILGIAEDTVNKHAASAARKLNAANKTQAVAEAI
RRHEIPW
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggaccggatcattcatgatcagggacgggacgccttcgacttcatcgacgcc
gtctcggacctgcatgacccggacgagatcatcgcccggttccatcgggcggtggcccgg
tacggctatgccaccttcatcatcacgggcctgccgggcctgacggagccgttcgaaacc
agggtgctgacacggcactggccggatgcctggttccggatctacacagccgagacctac
attctggacgacccggtcggctggcactgccgggtggcccctgcccccttcgcctggtcg
gaggcccctttcgaccccggccgacagccgcgatcccggcggatcatggaagaggccgca
agcttcggaatgaaggacgggctgtgcgtgccggttcacggcctgcaggggctggactgg
tgcgtatcgctgggcgggcccgatcccgatctgtcaccacgcgcccgagccgccgtgcat
ctgatggcgctttatgccttcgacggcctgcgccgacggctgctcagccccgacaccccg
ccaccgcgccgcctgaccgcgcgcgagcgcgaggtgatcgcctggaccgccgccggcaaa
tcggcctgggaagcgagctgcatcctggggatcgccgaggataccgtgaacaagcacgcc
gcttctgccgcccgcaagctcaatgccgccaacaagacccaggccgtcgccgaggcgatc
cgtcggcacgagatcccctggtga
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