Tistrella mobilis: TMO_c0759
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Entry
TMO_c0759 CDS
T02128
Name
(GenBank) sigma-54 interacting transcription regulator protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
tmo
Tistrella mobilis
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmo03000
]
TMO_c0759
Transcription factors [BR:
tmo03000
]
Prokaryotic type
Other transcription factors
Others
TMO_c0759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_16
AAA_5
NACHT
Mg_chelatase
AAA_22
AAA_19
ATPase_2
NTPase_1
AAA_30
T2SSE
TsaE
AAA_7
AAA_2
AAA_18
ResIII
AAA_14
KAP_NTPase
MCM
cobW
nSTAND3
IstB_IS21
Cas_Csm6_CARF
Motif
Other DBs
NCBI-ProteinID:
AFK57369
UniProt:
I3TX81
LinkDB
All DBs
Position
pTM3:902714..904321
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AA seq
535 aa
AA seq
DB search
MSKRRVAIGFVGTTLDVAAGPHRWKAWRPTIALIQQPEIGIDRLHLLHGAAARKLVARLV
DDIHLIAPRVEVHPEEVTIRDAWDFEEVYGLLHDFARSFPFDTEAEDYLIHMTTGTHVMQ
ICWFLLVEARYIPARLIQVSPPPARERPGGFGSHTIIDIDLARYDRIAGRFGQEQRERTS
FLKAGIDTRNPGFNRLIERIERVALHSTAPILLTGPTGAGKTALARRIFELKKQRRQVDG
AFVEVNCATLRGDGAMSALFGHVRGAFTGAVAERAGLLRAADGGLLFLDEIGELGLDEQA
MILRAIEEGRFLPVGADREAASRFQLIAGTNRDLGTAVADGRFREDLLARIDLWSFDLPG
LARRPEDIDPNLDEELRRHGVREGRQVSFSREARQRFLAFATGPGGLWPGNFRDLGAAVT
RMATLAPGGRITEEVVAEEIERLEWAWQRRAAPAREDPLPGLLSEARLAEIDPFDRVQLA
EVVRVCRSTPSLSAAGRALFAASRARKAAPNDADRLRKYLARFGLDWSSVQVLTE
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgccgggtcgcgatcgggttcgtgggcaccacgctggatgtggcggcgggc
ccgcatcgctggaaggcctggcggccgacaatcgccctgatccagcagccggagatcggc
atcgatcggctgcatcttctgcacggggccgctgcccgcaaactggtggcgcggcttgtg
gacgatatccacctgatcgcgccccgggtagaggtgcaccccgaagaagtgacgatccgc
gatgcctgggatttcgaagaggtctacggcctgctgcatgatttcgcccgcagcttcccc
ttcgataccgaggccgaggattatctgatccacatgaccaccgggacccatgtgatgcag
atctgctggtttctgctggtggaggcacgctacatcccggcacggctgatccaggtgtcg
ccgccgccggccagggaacggccgggcggcttcggcagccataccatcatcgatatcgat
ctggcgcgttacgaccgcatcgccggccgcttcgggcaggaacagcgcgagcgtacatcg
ttcctgaaagccgggatcgatacccgcaatcccggcttcaaccggctgatcgagcgcatc
gaacgggtggccctgcattcgaccgcgccgatcctgctgaccggcccgaccggcgccggc
aagaccgccctcgcccgccggatcttcgagctgaagaaacagcgccgccaggtcgacggc
gccttcgtcgaggtcaactgcgccaccctgcgcggcgatggcgccatgtcggccctgttc
ggccatgtccgcggcgccttcacgggggcggtggccgaacgggccgggctgttgcgcgcg
gccgatggcgggctgctgtttctggacgagatcggcgaactggggctggacgaacaggcg
atgatcctgcgcgcgatcgaggagggccgctttctgccggtgggcgccgatcgcgaggcc
gccagccggttccagctgatcgccggcaccaatcgcgacctcggcaccgccgtggcggac
ggccggttccgcgaggatctgcttgcccgcatcgacctctggagcttcgacctgccgggg
cttgcccgccggcccgaagacatcgaccccaatctcgacgaggaattacgccgtcatggt
gtccgggaaggccgccaggtctcgttcagccgcgaggcccggcagcgcttcctggccttc
gccaccggcccaggcgggctgtggccggggaatttccgcgacctcggcgccgcagtcacc
cggatggcaaccctcgcccccggcgggcggatcaccgaagaggtggtggcggaagagatc
gagcggctggaatgggcctggcagcggagggccgccccggcccgggaggacccgctgccg
ggtctgctgagcgaggcacggctggcggagatcgacccgttcgaccgggtccagctggcc
gaggtcgtgcgcgtctgccgcagcacacccagcctgagcgccgccgggcgggccctgttc
gcagcctcgcgagcccggaaagccgcacccaacgatgccgaccggctgcggaaatatctg
gcgcgtttcggcctggactggtcgagcgtgcaggtgttgacggagtga
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