Tistrella mobilis: TMO_c0786
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Entry
TMO_c0786 CDS
T02128
Symbol
lcfA
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tmo
Tistrella mobilis
Pathway
tmo00061
Fatty acid biosynthesis
tmo00071
Fatty acid degradation
tmo01100
Metabolic pathways
tmo01212
Fatty acid metabolism
tmo02024
Quorum sensing
tmo04146
Peroxisome
Module
tmo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tmo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
TMO_c0786 (lcfA)
00071 Fatty acid degradation
TMO_c0786 (lcfA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
TMO_c0786 (lcfA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
TMO_c0786 (lcfA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tmo01004
]
TMO_c0786 (lcfA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tmo04147
]
TMO_c0786 (lcfA)
Enzymes [BR:
tmo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
TMO_c0786 (lcfA)
Lipid biosynthesis proteins [BR:
tmo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
TMO_c0786 (lcfA)
Exosome [BR:
tmo04147
]
Exosomal proteins
Exosomal proteins of breast milk
TMO_c0786 (lcfA)
Exosomal proteins of breast cancer cells
TMO_c0786 (lcfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AFK57396
UniProt:
I3TXA8
LinkDB
All DBs
Position
pTM3:complement(938701..940431)
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AA seq
576 aa
AA seq
DB search
MTQMMGAGIDPGGAEPVWLRKYPADVNWRKTISPAPLTSLMDHAVKTFADRPAVDFLGKI
LTFGEIGRMVGQAAKGLQQIGVKPGDRVGLFLPNTPYSIVYYYAALTIGATIVNFNPLYA
LREIEHQVNDSGTRVMVTLDLAVVYDKVHELLGKTCLERIIVCPMAGVLPFPKNLLFPLV
KGKEIGKVEKSARIVQHKALMQNDGRYAPVQIDPETAVAVLQYTGGTTGLPKGAMLTHAN
LHANARQLEAWFPDARPGQERTMVVLPLFHVFAMTVCMNYSVLAGACMIMLPRFELDQVL
ETLAKKKPSLFPGVPTMYTAIAHHPKIRAFDLSSINYCLSGGAPLPLEVKQTFEKLTGCT
LVEGYGLTETSPVTHCNPFNGISKEGSIGLPMPGTTIEIVDLEDGETVLPQGSRGEICIR
GPQVMAGYWNKPEETAKTMAGGRLHTGDVGYLDEDGYAFIVDRIKDLIIAGGYNVYPRMV
EEAVYLHDLVEECTVIGIPDEYRGQTVKAFVKLKAGAHLTAAELTAFLKERLSPIEMPKQ
IEFRDALPKTLIGKLSKKELVQEEKEKYEARRKAAG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatgatgggtgccgggatcgatcccggcggagccgagccggtctggttgcgc
aaatatcctgccgacgtgaactggcgcaagacgatttcgcccgcgccgctgacatcgctg
atggatcacgcggtcaagaccttcgcggatcggccggcggtcgacttcctgggcaagatc
ctgaccttcggcgagatcgggcggatggtcggccaagccgcgaaagggctgcagcagatc
ggcgtgaagcccggcgaccgggtggggctgtttctgcccaacaccccctattcgatcgtt
tactactatgcggcgctgaccatcggcgccacgatcgtcaacttcaacccgctctatgcg
ctgcgcgagatcgagcatcaggttaatgacagcggcacccgggtgatggtgacgctggac
ctggcggtggtctacgacaaggttcacgagctgctgggcaagacctgtctggagcggatc
atcgtctgccccatggccggcgtgctgcccttccctaagaacctgctcttcccgctggtg
aagggtaaggagatcggcaaggtcgaaaagagcgcccggatcgttcagcacaaggcgctg
atgcagaatgacgggcgctatgccccggttcagatcgaccctgaaaccgcagtggcggtg
ctgcagtataccggcggcaccaccggcctgcccaagggcgcgatgctgacccatgccaat
ctgcacgccaatgcccggcagctggaggcctggttcccggatgcgcgtccggggcaggag
cgcaccatggtggtgctgccgctgttccatgtcttcgcgatgacggtctgcatgaattat
tccgtgctggccggcgcctgcatgatcatgctgccgcgcttcgaactggaccaggtgctg
gaaacgctggcgaagaagaagcccagcctgtttccgggcgtgccgaccatgtacacggcc
atcgcccatcatccgaagatccgcgcgttcgatctctcgtcgatcaattactgcctgtcg
ggcggtgcgccgctgccgctggaggtgaagcagaccttcgaaaagctgaccggctgcacc
ctggtcgaaggctatggtctgaccgagacctcgcccgtcacccattgcaacccgttcaac
ggcatcagcaaggaaggctcgatcggcctgcccatgccgggcaccacgatcgagatcgtc
gatcttgaggatggcgagaccgtgctgccccagggcagccgcggcgaaatctgcatccgc
gggccccaggtgatggccggctactggaacaaaccggaagagaccgcaaagaccatggcc
ggcggccggctgcacaccggcgatgtcggctatctggacgaggacggctatgccttcatc
gtcgaccggatcaaggatctgatcatcgccggcggctacaacgtctatccgcgcatggtg
gaagaggcggtctatctgcatgatctggtggaggaatgcaccgtcatcggcattcccgac
gaatatcgcggccagacggtcaaggccttcgtgaagctgaaggccggcgcccatctgacc
gcggccgaactgaccgccttcctgaaggagcggctgtcgccgatcgagatgcccaagcag
atcgagttccgcgacgccctgcccaagaccctgatcggcaagctgtcgaagaaggaactg
gtgcaggaggagaaggagaaatacgaggcgcgccgcaaggcggccggttga
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