KEGG   Tenebrio molitor (yellow mealworm): 138131875
Entry
138131875         CDS       T10686                                 
Symbol
Gnf1
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
tmol  Tenebrio molitor (yellow mealworm)
Pathway
tmol03030  DNA replication
tmol03410  Base excision repair
tmol03420  Nucleotide excision repair
tmol03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tmol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    138131875 (Gnf1)
   03410 Base excision repair
    138131875 (Gnf1)
   03420 Nucleotide excision repair
    138131875 (Gnf1)
   03430 Mismatch repair
    138131875 (Gnf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmol03032]
    138131875 (Gnf1)
   03400 DNA repair and recombination proteins [BR:tmol03400]
    138131875 (Gnf1)
DNA replication proteins [BR:tmol03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    138131875 (Gnf1)
DNA repair and recombination proteins [BR:tmol03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     138131875 (Gnf1)
SSDB
Motif
Pfam: RFC1 AAA BRCT AAA_22 AAA_30 RuvB_N AAA_14 nSTAND3 AAA_18 PTCB-BRCT AAA_17 RNA_helicase AAA_16 BRCT_2 AAA_assoc_2 AAA_33 Sigma54_activ_2 AAA_5
Other DBs
NCBI-GeneID: 138131875
NCBI-ProteinID: XP_068905235
LinkDB
Position
5:19926846..19931235
AA seq 1021 aa
MSRDIRSFFTVLSKKPGREPPKNVPPSSKKKPKRLIDSDDEDVISSTPEQKKTKTKKPEK
KQKIEVVSSDSESESPKKTTPKKPETSNTSNLKPVNVADIFKNTPIKQSKVEPKPVSEVK
IEEKGSKKTKSRKKKGNDPEKTVHNNEHFEKTLNELDDDDVFEKNIDMLDKTVTEALLHL
EEEKKESVSDTENKPEKTVKKRSRNDSSSDNHTPKKKKLEHFDSGIDPGQEAHEKKRYSA
MLYQKYLNRSGPKNHGMKEYPKGKPNCLNNLCFLKTGVLDSLESEEFENLIKQHGGRVVH
GISKKVNYVVIGEDPGPAKLAKAETYNIPSISEDELLDLILEKSGMEPKYCKKNTSASSE
DLGFENDNEIKPAAKEKMVDKETNKQPEVKSKKVEENDKKVKEPVKVKLEGGESSKKSEG
SSPDTVLSKPSTSKAVKTPTKSVPQKSIVHCKPVPDPSMLPLTEKYKPQTLRAVIGQQGE
MSNLYKLKLWLENWQKNQDPKVKKTLIRPSPWAKKDDGAYFKCALLSGPPGVGKTTSATL
VAKELGLDIVEFNASDTRSKKLLHEEVSQLLSSKTIAGYATGQSNVSRNRVLLMDEVDGM
AGNEDRGGIQELIQLIKNSSIPIVCMCNDRNHQKMRSLVNYCFDLKFTKPRLEQIRGAML
TICCKENIQISTKALTEIIAGTGCDVRQTLNHLAILASTKEEITEEVAAKEAKASKKDSV
MGPWEVCRTVFTKSEHKDMSTVDKARLFFFDYSLGPLFVQENYLKVQPEGNKKQVLLRAA
FSADSISMGDIIDSKIRRTNNWSLLESQAFYSSVLPGHYMSGNFVGQINFPGWLGKNSKK
NKFKRLISELQAHTRTSASASKMAVKLDYLVPLRNAILSPLKKQGLEGIDQAVAVMKNYN
LLREDVDSLLELCQWTGGENPMNSVETKVKSAFTRAYNKQVTLLPYAPASVVSKKRAVAL
ENDVLGNEEVVESDNEDEDDVTNNAMIKVKKKPVGKGKKTEDSAGTSKKNQTKKPRGGKK
K
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgtcgagagatattcgttcattctttacagttctttcgaaaaaacccggtagagagcca
ccaaaaaatgttccaccttccagtaagaaaaaacctaaacgattaattgattctgatgat
gaggatgttatatcgagtacacctgaacaaaaaaagactaaaacgaagaagccagaaaag
aaacaaaaaattgaagttgtaagttcagattcagagagtgaatcaccaaagaaaacgact
cctaagaaacctgaaacaagtaatacatcaaatcttaaaccagttaatgtagcagatata
tttaagaacacccccataaaacagagcaaggtcgagcctaaaccagtaagtgaggtgaaa
attgaagaaaaaggatcaaagaaaactaagtcaagaaagaaaaaaggtaatgatcctgaa
aagactgtccacaacaatgaacattttgaaaaaacacttaatgagttggatgatgatgat
gtgtttgaaaagaacatagatatgttggataaaactgtgacagaagcattacttcattta
gaggaagagaagaaagaaagtgtaagtgatacagaaaacaagccagaaaaaactgtaaag
aagaggtctagaaatgattcatcaagtgacaatcacacaccaaagaagaagaagctggaa
cattttgactcaggaattgaccctggccaagaagctcatgaaaagaaaaggtactcagca
atgctgtatcagaaatacctaaacagaagtggtcctaaaaatcatggaatgaaggaatat
cctaagggaaaaccaaattgcctgaataatttatgctttttaaaaactggagtcttggat
tctcttgaatctgaagaatttgagaatttaataaagcaacatgggggtcgtgtggtacat
ggtatatcaaaaaaagtgaattatgttgtcattggagaagacccaggaccagccaaattg
gccaaggctgaaacttacaacatccccagtatttcagaagatgaactcttggacctgatt
ttagaaaagtctggcatggaacctaaatactgtaagaaaaatacttctgctagcagtgaa
gatctagggtttgagaatgacaatgaaattaaaccagctgcaaaagaaaaaatggttgat
aaggaaacaaataaacaacctgaagtgaagtcaaagaaagttgaagaaaatgataagaaa
gtcaaagaaccagttaaggtaaaattagaaggaggagagtctagtaagaagagtgaaggg
agttcacctgatactgttcttagtaaaccaagtaccagcaaggctgttaaaactcctact
aaatcagttcctcaaaaatctattgtacactgtaaacctgtacctgatccttcaatgttg
cctcttactgaaaaatacaagcctcagacactcagggctgtcataggacagcaaggtgag
atgagtaatttgtacaaactgaagctctggctggaaaattggcaaaagaatcaagatcct
aaagtgaaaaaaacgctaattcgccccagtccttgggccaagaaggatgacggcgcatac
ttcaaatgcgcactcttgagtggacctccaggagtcggaaaaacgacatccgcgactctt
gtggccaaggagttgggattggacattgttgaattcaatgcttctgataccagaagcaag
aagttgttacatgaagaagtgtcacagctgttgagtagcaagaccattgctgggtatgcc
accggccaatctaacgtgagcagaaatcgcgtcctgctgatggacgaagtggacggaatg
gcaggaaacgaagatcgaggcggcatccaagagctcattcagctgatcaaaaactccagc
attccaatcgtgtgcatgtgcaatgacaggaaccaccaaaaaatgagatcgctcgtcaat
tactgcttcgatctgaagttcaccaagcccagactggaacagatcagaggggcgatgctg
acgatctgctgcaaagaaaacattcaaatctcgacgaaagctctgacagaaatcattgcc
ggaacgggctgcgacgtcagacagactctcaaccatctggcgattttggcgtcgacgaaa
gaggaaattacagaggaagtcgccgcaaaggaggccaaggcttcgaagaaggactccgtc
atgggtccctgggaggtctgccggaccgttttcaccaagagcgaacacaaagacatgagc
accgtcgacaaagctagattgttcttctttgattacagtttggggccgcttttcgttcaa
gaaaactacctcaaagttcagcctgaaggaaacaagaagcaagtgttgttgagggctgcg
ttcagtgcagactctatcagcatgggcgacattatcgattcaaagattcgtagaactaac
aattggtcgctgttggagtcccaagctttttattcttcggtgctaccgggacactacatg
tcgggtaattttgtcggtcagatcaacttcccaggctggctcggcaaaaattccaagaaa
aataaattcaagagactgatcagcgagttacaagctcacacacgcaccagcgcgtctgct
agcaaaatggctgtcaaattagactacttggtgcctctgaggaatgccatattgtcacca
ctgaagaaacaaggtttggagggtatagaccaagcagttgccgtaatgaagaattacaat
cttctgagggaagatgttgacagtttattagaactttgtcaatggaccggtggagaaaat
ccgatgaatagcgtagaaactaaggtgaaaagtgctttcactcgagcttacaacaaacag
gttactttattaccatacgcccctgcgtctgtggtatcaaagaaaagagctgtcgcttta
gaaaacgacgtattaggtaatgaggaagtcgtagaatcggataatgaagacgaagatgat
gtcaccaataacgcgatgattaaggttaaaaagaaaccagtcggtaaagggaagaagacc
gaagattctgctggtacaagtaaaaagaatcagactaaaaaaccaagaggaggaaaaaag
aaataa

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