Tenebrio molitor (yellow mealworm): 138131959
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Entry
138131959 CDS
T10686
Symbol
fand
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tmol Tenebrio molitor (yellow mealworm)
Pathway
tmol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138131959 (fand)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmol03019
]
138131959 (fand)
03041 Spliceosome [BR:
tmol03041
]
138131959 (fand)
Messenger RNA biogenesis [BR:
tmol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138131959 (fand)
Spliceosome [BR:
tmol03041
]
Complex B
Other components
Prp19-related factors
138131959 (fand)
Complex C
138131959 (fand)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_2
TPR_15
TPR_12
Mad3_BUB1_I
TPR_10
NRDE-2
PPR
DHR-2_Lobe_A
ARM_TT21_C
Tcf25
ARM_TT21
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
138131959
NCBI-ProteinID:
XP_068905351
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Position
5:complement(177113..181373)
Genome browser
AA seq
847 aa
AA seq
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MPVSNKGTPMEIIFTDDDLPYEEEILRNPYSVKHWLRYIDHKKKAPKHGVNIIYERALKE
LPGSYKLWYNYLRTRRLQVKNRCITDPAYEDVNNAFERSLVFMHKMPRIWMDYCTFLTDQ
CKITRTRKVFDRALRALPVTQHHRIWPLYLTFVKKHDIHETAVRIFRRYLKLCPENAEEY
VEYLSEVGRLDEAAVVLGKIVNDENFVSQHGKSKHQLWNELCELISKNPEEVHSLNVDAI
IRGGLRRYTDQLGHLWNSLATYYVRSGLFDRARDIYEEAIQTVATVRDFTQVFDAYAQFE
ELTLSKKMEEVAKLPNPAEDDDIELELRLARFENLMERRLLLLNSVLLRQNPHNVQEWHK
RVQLYEGKPHEIINTYTEAVQTVDSKLAVGKLHTLWVEFAKFYETNNQIEDGRMIFEKAT
QVAYVKVDDLATVWCEWAEMEIRNENYEQALKLMHRASTMPSRKVAYHDDTETVQARLYK
SLKVWSMYADLEESFGTFKSCKAVYDRIIDLKIATPQIIINYGLFLEENKYFEEAFRAYE
KGISLFKWPNVYDIWNTYLTKFLRRYGGSKLERARDLFEQCLENCPPQFAKSLYVLYAKL
EEQHGMARHAMAVYERATSAVPQEEMFEVFNIYIKRAAEIYGIPKTRQIYEKAIEVLPED
KTREMCIRFADMETKLGEIDRARAIYSHCSQICDPRVTTEFWQIWKEFEVRHGNEDTMRE
MLRIKRSIQAMYNTQVNMMSAQMLSSAGSIAGTVADLAPGVKDGMRLLEAKAAEMAGTST
GTRPGNIMFVRGETQGDNKDKVVNPDEIDIDDDEEDEGEDVPVEKQSIPSEVFGGLKKND
DSVEDEA
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgccggtctccaacaagggcaccccaatggaaattatcttcactgatgatgatttgccg
tatgaggaagaaattctacggaatccctactctgtcaagcactggctcagatacatcgac
cacaaaaagaaagctcccaagcacggcgtgaacatcatttacgaacgagccctgaaagaa
cttccaggctcatacaaactctggtacaattacttgcgcacgcgccgcctccaagtcaaa
aatcgctgcattactgaccccgcttacgaagacgtgaacaacgctttcgaacgctcgctc
gttttcatgcacaagatgccgcgaatatggatggactattgtacttttctgactgaccag
tgtaagatcactcgaaccagaaaagtttttgatcgcgcgttgagggcgctgcctgtcacc
cagcatcacaggatttggcctctctatttgaccttcgtcaaaaaacacgacattcatgag
actgctgtgcgaatattcagacggtacctcaaactctgtcctgaaaatgctgaagagtat
gtcgagtatttgtctgaagtggggcggcttgacgaagccgctgttgttctggggaagata
gtgaacgacgagaatttcgtgtcgcagcatggaaaatccaagcatcagttgtggaatgag
ctatgtgaactgatttctaaaaatcctgaagaggtgcactcattgaatgttgacgctatt
atcagagggggcttgcgacggtacactgaccagttaggacatctgtggaattctttagct
acatattacgtgaggagtggtttgtttgacagggcgcgtgatatttatgaggaggcgatc
caaacagtggcgaccgtgcgtgatttcacgcaggtttttgacgcttatgcccagtttgaa
gagttgacgctgagcaagaagatggaggaggtggctaagctgcctaatccggccgaagat
gatgacattgagttggagttgaggttggcgcggttcgagaatttaatggagaggcggttg
ttgctattgaattcggtgcttttgaggcagaatccgcataatgtccaggagtggcacaaa
cgagtacaactttacgaaggcaaaccacacgaaatcatcaacacctacaccgaagccgta
caaaccgtggactccaaactggccgtcggcaaactccacaccctctgggtggaattcgct
aaattttacgaaaccaacaatcaaatcgaagacggccgcatgatcttcgagaaggccacc
caagtagcttacgtcaaagtcgacgatttagcaacggtttggtgcgagtgggccgaaatg
gagatccgcaacgagaactacgaacaagcactcaaactgatgcacagagctagtaccatg
ccttcgagaaaagtggcgtaccacgacgacaccgagactgtgcaagcaagactgtacaaa
tcgctgaaagtgtggtcgatgtacgccgacctggaggagagtttcggtactttcaagtct
tgtaaagctgtctacgacaggattatcgacttgaagatcgctactcctcagatcattatc
aattatggattgtttctggaagagaacaagtactttgaggaagctttcagagcttacgaa
aagggaatatcgttgttcaagtggcccaacgtgtacgacatttggaacacttacttgacc
aaattcttgagaaggtatggtgggagtaagctggagagggcgagagacttattcgagcag
tgcttggagaactgccctccacagttcgccaagagtctctacgtactctacgcaaaactg
gaagagcaacacggaatggctcgtcacgccatggcggtctacgagcgcgccactagcgca
gtaccacaagaagaaatgttcgaagtgtttaacatctacatcaagagagccgcagagatc
tacggtattcccaagaccaggcaaatatacgagaaagccatagaagtactaccggaggac
aagactcgcgagatgtgcatcagattcgccgacatggagacgaagctaggcgagattgac
agagctcgcgccatctactctcactgcagtcaaatctgcgacccccgagtcaccaccgag
ttctggcaaatttggaaagagttcgaagtgaggcacggcaacgaagacaccatgagggaa
atgttgaggatcaagaggagcatacaggccatgtacaacactcaagtgaacatgatgtca
gcgcagatgctgagttctgctggttccatcgccgggactgtggcagatttggcgccgggg
gtcaaggatgggatgcggctgctcgaggcgaaggcggccgagatggcagggacttcgacg
gggaccaggcccgggaatatcatgttcgtcaggggagagacgcaaggggataataaagat
aaagttgtcaatccggacgaaatcgatattgatgatgacgaggaggacgaaggggaggat
gttccggtggagaagcagagtattccgtcggaggttttcggagggttgaagaagaatgat
gatagtgtggaggatgaggcgtga
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