Tenebrio molitor (yellow mealworm): 138132071
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Entry
138132071 CDS
T10686
Symbol
Rrp42
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
tmol Tenebrio molitor (yellow mealworm)
Pathway
tmol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138132071 (Rrp42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmol03019
]
138132071 (Rrp42)
Messenger RNA biogenesis [BR:
tmol03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138132071 (Rrp42)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
138132071 (Rrp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
138132071
NCBI-ProteinID:
XP_068905513
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All DBs
Position
1:42443401..42444652
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AA seq
285 aa
AA seq
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MALCEAEKTFVLHGVEENFRIDGREREDYRPMELETNIVAHAFGSARLRLANTDVLVAVK
LEVDAPFPEKPREGKLEFFVDCSANATPDFEGRGGEDLAVEISNCLASAYKSPQVFDLTK
LCILKGHKCWKIFVDILLLECGGNLYDAVSIAVKTALWDTRIPLVRSVTVDGSNIDMDVS
DELHDCQKLDVSGAPIMVTVCKIGEQCIVDPNVAEEQCSVGAVVIAVSRDKFSTVLQTGS
GSLHPQTLLESLQMGQKVAHRLSEALSETLEEVKKSANQDVGFLR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcgttatgtgaggccgaaaaaacattcgttctgcatggagtcgaggaaaactttcga
atagatggccgcgaacgcgaagactacaggccaatggaactcgaaaccaatatagttgct
catgctttcggatccgccaggttacgcttggccaacactgacgttttagtagctgtgaaa
cttgaagttgatgcgccatttccggaaaaaccgcgtgaaggaaaactggaattttttgtt
gattgttcagcaaatgctactcctgattttgaaggcagaggaggagaagacttggctgtt
gaaatatcaaactgtctagcttctgcatacaagtccccgcaagtgtttgatttgaccaag
ttatgcatactaaagggacataaatgttggaaaatatttgttgacattcttttgttggaa
tgtggtggtaatttatatgatgctgtgtcaatagcagtaaaaacagctctttgggataca
agaatacctctagtcagatctgtaactgttgatggaagtaatattgatatggacgtttct
gatgaactgcatgattgtcaaaagttggacgtttcaggagcaccaattatggtgacggtg
tgtaaaataggggagcagtgtattgtggacccgaatgttgcagaagagcagtgctcagta
ggcgctgttgtcattgcagtttctcgcgacaaatttagtacagttctgcagacaggatcg
ggatcgttgcacccccaaactttactggagtcgcttcaaatgggccaaaaagttgcccac
agactaagcgaagctctttcagaaaccttggaagaagtaaagaaaagtgccaaccaggac
gtcggatttttgagataa
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