Tenebrio molitor (yellow mealworm): 138133269
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Entry
138133269 CDS
T10686
Symbol
Pcf11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
tmol Tenebrio molitor (yellow mealworm)
Pathway
tmol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138133269 (Pcf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmol03021
]
138133269 (Pcf11)
03019 Messenger RNA biogenesis [BR:
tmol03019
]
138133269 (Pcf11)
Transcription machinery [BR:
tmol03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138133269 (Pcf11)
Messenger RNA biogenesis [BR:
tmol03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
138133269 (Pcf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Pcf11_helical
Pcf11_C
zf_PCFS4
Pfc11_Clp1_ID
YjbH
CTK3
GDPGP1_N
Motif
Other DBs
NCBI-GeneID:
138133269
NCBI-ProteinID:
XP_068907226
LinkDB
All DBs
Position
6:complement(1832956..1846999)
Genome browser
AA seq
1661 aa
AA seq
DB search
MILTETTMNSEEIKAEYTSSLTDLTFNSKPLINVLTMLAEENLAHAPLIVEAIEEHLDKV
QTNVKLPILYLVDCIAKNIGQTYTTLFSQNIVKTFCSVFKVVDEETRAEMFKLRQTWNNI
FPQMKLYAIDVQISMLDPAWPVTAQPPSNSIHFNPKFLKTTKNKAEMAPIVPEPATAALD
METFTMQQKLIQKQKELIELQQKKLKLELLQTQVKLQKQLESNPNAVVANNLPVRTQNIL
LKPEVAKQLMPEVGKQSMPIGLGKAKAGLGGSSRVQQSMPRITPVSGALVAAATKPTRDP
RLLRQQTDKTSNGTNSSTSSGVSLGSKTAILDSNNKVVTNTKSVRDGRVDARLVNKDNAP
PSQNKLDKSKTFPKSRQSEQKPIKPSRSKNVADTDAKAFSVKSSVSLLDSPTKSKSDKSE
TKSPTKSPSRHKKKDHNDKKGGGFKEAKRERDAKGHKIEACATFKGGAKGKNRNYIRRNR
SPSYSPEPSQDTDLRLAGPPEKQARMQIDPDDKSSSKAVDVDLRQLNEVAKKRTSTENLE
SGQNKKSKSEVFDALFGNEDTDLRTVLPVVQPERPPTPPPPIISLAEKEKEKESPKKSSD
FDAVRAKLANATGWDKIMSKSFRKKRPQEDEDLRVPPNDSMKKIIISSDDEQCIKAGTMT
KEQEKQLMNKIIAQIEHQKLKEAQLKDKEESSVGSLQPVSDEELDFGEEGGEGKFGDKDD
RVSFHKFPRESRRGGPYWRGKRRHWENPHPGPHPRPAGIRPWLHQMNAWRPIGPNFPARP
QQSSEFGAVPGEADGKKSPELPAEVTVDSVNQDDIKTINIDGVPRDIRYYEETAIVFMNW
DDPKEISFQNGNRRVVFDDNDAYLLSFNEPYKDVSIGGTMHKTRLGAPSREIFIDGRPYE
CYFGGPGITIDLNGQMTVVKLDGPPPQVKIGTAKRTDLVAGKVNLIIDAKILVPVFLDAK
VQKFVIDGETHTLKFVDALKTVLINDVPFKVEFGGLPKPITVHDKKHFIRFSVLPRGVKP
GLVRIKDMEGGQVAETDDSQDGSALPNIDINEPALPVFSRKKKVEDEQDRNSNSPHFFQH
FMQQNNLDVLSSVMTSSMTPIANSGGYQVENLPSNPPDTQNSHSLDSVPHVPPVPVLPAG
VNINELFQKLVATGIVATKEPVVEPPPPQQQHHHHHYQHHHHQPQLPPPPKPIKRNPLEH
LRPVLFARPESLKQRQNHLYEALYSGMQCSSCGMRFPPEQSMHYSQHLDWHFRQNRKGKK
NIRVAASRRWYYSLSDWKNYEEIEDLEEREKNYFDQQQSQAEGAGDDADEEVEIPSVLAD
PDIQDAHCEVCQDRFDHFFNEDKEEWHLKNAIRADDKTYHPVCYEDYQTSLLEPREETRI
EEEEEETKEKTEEQNIPGLEIILDDDDEEEQAEQPEEEVVIDESDESKPPNDESTKVVEE
PEKEENEENKEEDDDDVIINEVVPEKIEVDDDREYADTVASELPIKVEQIDDGFMDVEEG
LIKIKNGGQIKIKSEPLDPGTLFPRNPPEPTVDASGVADDELVTPREEASVFAEASQPTF
TSSIDGNTEPVLSVPTSTASIGSKIKINISKQLPVIAPKEPKDVPCDAVPCLDPVIDPSQ
PLPPGEEPVQLNVKPALRGVDLKKMPPVQKGSELTGMCSIM
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgattttaacggagaccacgatgaacagcgaagagatcaaggcggagtacacctccagc
ctgacggatctcactttcaacagcaaaccgctgatcaacgtgctgacgatgctggcggaa
gaaaacctggcgcacgccccgctcatcgtggaggcgatcgaagagcacctcgataaggtt
cagaccaatgtcaaacttcctattctgtatctcgtcgactgtatcgccaagaacattgga
caaacttacacgacactcttcagccaaaatatcgtcaagacgttctgcagcgttttcaaa
gtggtggacgaagaaactcgcgcggaaatgttcaaactccgccaaacctggaacaacatc
ttcccccagatgaagctctacgccatagacgtccagataagcatgctagatccggcctgg
cccgtcacggcccaacccccgtccaacagcatccatttcaatcccaaattcctaaaaaca
acgaaaaacaaagccgagatggctcccatcgttcccgaacccgcgaccgcggccctagac
atggaaaccttcacgatgcagcagaaactgatccagaaacaaaaggaactgatcgagctg
caacagaaaaagttgaagctggagctgttgcagacgcaggtcaagctgcagaagcagctg
gagagcaatccgaacgccgtggtggcgaacaatcttccggtgaggacgcagaacattttg
ttgaagccggaagtggcgaaacagttgatgccggaggtgggcaagcagtcgatgccgatc
ggattgggcaaggcgaaggccggtttgggtgggagttcgcgggtgcaacagtcgatgccc
cgaataactcccgtgagcggcgctctggtggcggcggcgacgaagccgacgcgcgacccg
cgtctgctgcgccagcagaccgacaagactagcaacggaaccaacagtagcactagtagt
ggtgtctcgttaggatctaagactgcaatattagattctaataataaagttgttacaaat
acaaagagcgttcgagacggccgtgtcgacgctcgtttagttaataaagacaatgcccca
ccatcccaaaacaaactagacaaatccaaaaccttcccaaagtccagacagtccgaacaa
aaaccgatcaaaccgtcacgtagcaaaaatgtcgccgatacggatgcgaaagcgttctcg
gttaagagttccgtcagtctgttggactcgccaacaaagagtaaaagtgataaaagtgag
acgaagtcgccgaccaagtcgcccagcaggcacaaaaagaaagatcacaacgacaaaaag
gggggaggattcaaggaggcgaagcgcgaaagggacgcgaagggtcacaagatcgaggcg
tgcgcgaccttcaaggggggtgccaaggggaagaacaggaattacatcaggaggaacagg
tcgccgtcgtacagtcccgaacccagtcaagacacggatttgagattggcggggcccccg
gagaaacaggcgcgtatgcaaatcgacccggacgacaagagtagtagtaaagcggtggac
gtggatctgagacagctgaacgaggtggcgaagaagaggacgtcgacggagaacctcgag
agcggccagaacaaaaagtccaagagcgaagtgttcgacgcgttgttcggtaacgaggac
acggatttgcggacggtgctgccggtcgtgcaacccgagcgtccccccacacctccgccg
ccgatcatttcgctggcggaaaaagagaaggagaaggagtcgccgaagaagtcgtcggat
ttcgatgcggtgagagccaagctggccaacgccaccggctgggacaagatcatgtccaag
tcattccggaagaagcgcccccaagaagacgaagacttgcgggtgccccccaacgacagc
atgaagaagattattatttcgtcggacgacgagcaatgcatcaaggcgggaacgatgacg
aaggagcaggagaagcagctgatgaacaagatcatcgcgcagatcgagcaccagaagctg
aaggaggcccagctgaaagacaaggaggagtcgtcggtggggagccttcagccggtcagc
gacgaagagttggacttcggagaagagggcggcgaggggaaattcggggacaaggacgac
cgggtcagcttccacaagttcccgagggagtcgcgaagggggggtccgtactggaggggc
aagaggcgccactgggagaacccgcacccggggccgcaccccagaccggcgggtatcaga
ccgtggctgcaccaaatgaacgcgtggaggcccatcgggccgaacttccctgcgcggccg
cagcagtcaagcgagttcggggcggtaccgggggaggcggacgggaagaagtcgcccgag
ctcccggccgaggtgaccgtggactcggtcaaccaagacgacatcaagacgatcaacatc
gacggggtgccgcgcgacatccggtactacgaggagacggcgatcgtcttcatgaactgg
gacgatccgaaggagatctcgttccaaaacgggaaccgtcgcgtcgtcttcgacgacaac
gacgcgtacttgttgtcgttcaacgaaccgtacaaagacgtcagcatcggcggaacgatg
cacaagacgaggctgggcgcccccagcagggagatatttatcgacgggaggccgtacgag
tgctacttcggggggcccggcatcacgatcgacctaaacggccagatgaccgtggtcaag
ctagacgggccgccgccccaagtgaaaatcggcaccgcgaaaagaacggacttggtcgcg
ggcaaagtaaatctgataatcgacgcgaaaatcctggttcccgtattcctggatgccaaa
gtgcaaaagtttgttattgatggtgaaactcatacattaaaatttgtagatgctttgaaa
actgttttaataaatgatgttccatttaaagttgaatttggtggcctccctaaacctata
actgtccatgataagaaacactttatcaggttttcagtgctgccgagaggcgttaaacca
gggctggtgcgcataaaagacatggagggcgggcaagtcgccgagaccgacgacagtcag
gacggctcggccttgcccaacatcgacattaacgagcctgctttgcccgtcttctcacgc
aagaaaaaagtggaagatgagcaagacaggaactcgaactcgccgcacttcttccaacac
ttcatgcagcagaacaacttggacgttctgtcgagcgtgatgacatcctcgatgacgccg
atcgccaacagcggaggttaccaagtcgaaaacttgccgtcgaatcctcccgacacccaa
aacagtcactccctggactcggtgccccacgtcccaccggtaccggtcctccccgccgga
gtcaacatcaacgaactcttccaaaaactggtggccacggggatagtcgccaccaaagaa
ccggtggtcgagccgccgccgccacaacaacaacatcatcatcatcactaccagcaccac
caccaccaaccacaactaccaccgccgcccaaaccgatcaagcgcaaccctctcgagcac
ctcaggccggtgctcttcgccagaccggagagcctgaagcagcgccagaaccacctctac
gaggcgctctactccggcatgcagtgcagcagttgcggcatgcgtttccccccagaacaa
agcatgcactacagccaacacctcgactggcacttccggcagaaccgcaagggcaaaaag
aacatcagagtggcggcgagtcgcaggtggtactattcgctgtccgactggaagaactac
gaagagatcgaagacttggaggagcgcgagaagaactacttcgaccagcagcagtcgcaa
gcggagggcgccggcgatgacgccgacgaagaggtagaaataccgagcgtcctcgccgac
cccgatatccaagacgcgcactgcgaagtgtgccaagacagattcgaccacttcttcaac
gaggacaaggaggagtggcacctgaagaacgcaatcagagcggacgacaagacttaccat
cccgtgtgctacgaagactatcagacgtcgctgctggagccgcgcgaagagactcgaatc
gaagaggaagaagaagagacgaaagaaaaaacggaagagcagaacattccaggtctggag
atcatcctcgacgacgacgacgaggaagagcaagcggagcagcccgaagaagaggtagtg
atcgacgagagcgacgagtcgaagccgcctaacgacgaatcgacgaaagtcgtcgaagaa
ccggagaaagaagagaacgaagaaaacaaggaggaggacgacgacgacgtgatcatcaac
gaggtggtgcccgagaagatcgaagtcgacgacgaccgcgaatacgcagacacggtggcg
tcagagctgccaatcaaagtggagcaaatcgacgacggtttcatggacgtggaggagggc
ctgatcaagatcaagaacgggggccaaatcaagatcaaaagcgagcccctcgaccccggt
acgttgttcccccggaacccccccgaaccgacggttgacgcttctggtgttgcagatgac
gaactggtgacgccacgcgaagaggcgtcggtcttcgcggaagcgtcccagccgaccttc
accagttcgatagacggcaacaccgaaccggtgttgagcgttcccacgtctaccgccagc
atcggcagcaaaatcaagataaacataagcaagcagctaccggtgatagcgcccaaagaa
ccgaaagatgtgccgtgcgacgccgtcccctgtctggacccggtgatcgacccctcgcag
ccgctgcccccgggagaggagccggtccagctgaacgttaagcccgccctgagaggcgtc
gacctgaagaagatgccgccggtgcagaaaggcagcgaactgacagggatgtgttcgatc
atgtga
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integrated database retrieval system
