Tenebrio molitor (yellow mealworm): 138134501
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Entry
138134501 CDS
T10686
Symbol
Upf1
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
tmol Tenebrio molitor (yellow mealworm)
Pathway
tmol03013
Nucleocytoplasmic transport
tmol03015
mRNA surveillance pathway
Brite
Enzymes [BR:
tmol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138134501 (Upf1)
5.6.2.5 RNA 5'-3' helicase
138134501 (Upf1)
Messenger RNA biogenesis [BR:
tmol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
138134501 (Upf1)
mRNA cycle factors
Common to processing body (P body) and stress granule
138134501 (Upf1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138134501
NCBI-ProteinID:
XP_068908907
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Position
7:6089820..6095659
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AA seq
1095 aa
AA seq
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MSVDAYGPSSQTLTFLETEENDLIGADTQGSECEFTDFTIPSQTQASQHDHAGPKVSGVQ
LNNNINNKIASATSTLGELQFEEEDEEYFNSKELPNYACKYCGIHEPNCVVMCNCCKKWF
CNGRGNTSGSHIINHLVRAKHKEVTLHKDGPLGETILECYSCGVRNVFVLGFIPAKADSV
VVLLCRQPCAAQNSLKDMNWDQDQWKPLITDRCFLTWLVKIPSEQEQLRARQISAQQINK
LEELWKDNVDATFQDLERPGVDEEPQQVLLRYEDGYQYQNIFGPLVKLEADYDKRLKESQ
TQENIEVRWDVGLNKKTIAYFTLAKTDGDMKLMHGDELRLRYVGELHKSWAGVGHVIKVP
DNYGEDIGIELKNGNGAPTDCNSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSAYIYHR
LLGHEVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSAT
IVYQLVKQNGGPVLVCAPSNTAVDQLTEKIHKTNLKVVRLCAKSREAIDSPVSFLALHNQ
IRKMEANTELQKLQQLKDETGELSSVDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPR
LVRLKFHSILIDESMQATEPECMVPVVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQSL
FERLVVLGIRPFRLEVQYRMHPELSRFPSNFFYEGSLQNGVCADERKLNKIDFPWPIADR
PMFFHVTQGQEEIAGSGTSYLNRTEAANVEKIATRFLRSGVKPEQIGVITPYEGQRAYLV
QYMQYQGSLHSKNYQEIEIASVDAFQGREKDIIIMSCVRSNEHQGIGFLNDPRRLNVALT
RAKYGIIIVGNPKVLSKQPLWNHLLSFYKEQKVLVEGPLTNLKESLIQFAKPKKLTNSDN
PGSHFMTTSMFDAREAMVPGSIYDRTNTAINGQFNYPRGAVPLDIFSRTHDPISYISQER
AQAGMNLPVPVGVFMNMADVPPRFYNQHQQAMQARQQQNPRNRKPPVRQKGKTLSQEQTQ
PFSQSLQLTQGMSQPGLSQPGFSLSQPGLSQPELSQDPYMAEYQSQMDGLLSQDSTYQGD
RSAFYPPNAQFSQPY
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcgacgcatacggccccagttcgcaaactctcacgtttttggaaaccgaagaa
aatgacttgatcggagctgacacccaaggttcggagtgcgaattcaccgatttcacgata
ccatcgcaaacgcaagcttctcaacatgaccacgcgggccccaaagtatcgggcgtgcag
ctcaacaacaacattaacaataaaatcgcaagcgccaccagtactctgggtgaattgcag
ttcgaagaggaagatgaagaatacttcaatagcaaggaattgcctaattacgcgtgcaaa
tattgcggcattcatgagccgaattgcgtcgtcatgtgcaactgctgcaagaaatggttc
tgcaatggacgtgggaacacctcaggcagccacataatcaaccatctggttagggccaaa
cacaaggaagtgaccttgcacaaggatggtcctttgggggaaacaatcctggaatgctac
agctgtggcgtacgcaatgtgtttgttttaggttttattccagctaaagctgactctgtt
gtggtgttactatgcagacaaccatgtgctgctcaaaattccctaaaggacatgaactgg
gatcaagatcaatggaagccactcatcactgatcgctgcttcctcacttggcttgttaaa
atcccctctgaacaagaacagctgcgcgcccgccaaatttccgctcaacaaatcaataaa
cttgaagagttgtggaaggacaacgttgatgccacttttcaagacttggaaaggcctgga
gttgatgaagaacctcaacaagtgttattgagatatgaggatggctaccaatatcagaat
atttttggaccccttgtgaaattagaggcagattatgacaagagactgaaggagtcccaa
actcaagaaaatatagaagtgagatgggatgttggtttgaacaaaaaaacaattgcttat
tttacccttgctaaaactgatggggatatgaaattaatgcatggggatgagttgaggctc
agatatgtgggtgaactgcacaaatcctgggcgggtgtgggacacgtcatcaaagttcct
gacaattatggtgaagatataggaattgagttgaagaatggaaatggggcacctaccgat
tgtaacagtaattttgttgttgacttcatttggaaaagcaccagttttgacaggatgcaa
cttgctttgcgaaaattcgccgtcgatgacacttcggtctccgcgtacatctaccaccgg
ctcctcggccacgaagtggaggaagttttgttcagatgccaccttcccaaacatttctcc
gcccccaatctacccgatctgaatcgttctcaagtctacgccgttaagcacgcccttcag
agacctctgtccctcatccagggccctccgggtaccggaaaaaccgtcacttctgccacc
atagtctatcaacttgtgaagcagaacggcggtcccgtcctcgtgtgcgcccccagtaat
acagccgtcgatcaactgaccgaaaagatccacaagaccaatctcaaggtcgtgagattg
tgtgcgaaatcgcgcgaagcaatcgattctcccgtgagtttcttggcattgcacaatcaa
attcgcaaaatggaggccaacaccgaactccagaagttgcaacaactgaaagacgagacc
ggagaattgagctccgtggacgagaagaggtacaggatgttgaagaagttggccgagaag
gagttgttggaagctgccgacgtcatctgttgcacgtgcgtaggggcgggtgatccgcga
ttagtccgcttaaagttccactcgattctgatcgatgagagtatgcaagccacggaacca
gaatgcatggtaccggtggttctgggagtgaaacagctgattttggtaggagatcattgc
caattgggcccagtagtcatgtgtaagaaagccgcgagagctggactgtcgcagagttta
ttcgaaagactagtcgtgttgggaattcggcccttccgcttggaagttcaatacagaatg
catccagagctgtcgaggttcccttcgaatttcttttacgaggggagcttgcagaatggg
gtgtgtgctgacgagagaaaattaaataagatcgattttccgtggccgatcgcggatagg
ccaatgttttttcacgtaactcagggacaggaggagatcgccggttctggtaccagttac
ttgaataggaccgaagccgccaacgtcgagaagatcgctaccagatttttgcggtccggc
gtcaaacccgaacagatcggggttatcactccctacgaaggtcagagagcgtacctggtc
cagtacatgcagtaccaaggttccctccatagcaaaaattaccaggagatcgagatcgca
agcgtggacgcttttcaaggccgcgagaaagacatcataataatgtcgtgcgttcgatcg
aacgaacatcaaggaatcggttttctgaacgatcctcgacgtctcaacgtggctttgacc
cgcgccaaatacggaattataatagtcggcaatccgaaagtcctgtcgaagcaaccgctg
tggaaccatctgctatcgttctacaaggagcagaaggtgctggtcgaaggacccctaacg
aacctgaaggaatctctgattcagttcgccaagccgaagaaattgacaaattcggataat
ccgggatcgcatttcatgaccacttcgatgttcgacgcccgcgaagccatggtacccggt
tcgatttacgacagaacgaacacggcaatcaacggccagttcaattacccccgcggagcc
gtcccgttggatatattcagccgcacccacgatccgatcagttacatttcccaagaaaga
gcccaagcgggaatgaaccttcccgtgccggtgggcgtgttcatgaacatggcagacgtc
cccccgcgattctacaaccaacaccagcaggccatgcaagcgcgccaacagcaaaacccg
cgcaaccggaagcccccggtccgccagaaaggcaagacgctcagccaagagcagacgcaa
ccgttcagccaaagtctgcagctgacccagggcatgtcgcagcccggactgtcccagccg
gggttcagtctgtcgcagccggggcttagccagcccgaactcagccaggatccgtacatg
gccgagtatcagtcgcaaatggacgggctattgtcgcaagattcgacctatcagggagac
agatcggcattctatccgccaaacgcccagttctcccaaccatattga
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