Tenebrio molitor (yellow mealworm): 138137628
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Entry
138137628 CDS
T10686
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
tmol Tenebrio molitor (yellow mealworm)
Pathway
tmol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138137628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmol03041
]
138137628
Enzymes [BR:
tmol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138137628
Spliceosome [BR:
tmol03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138137628
Complex B
138137628
Complex C
U2 SnRNP specific factors
138137628
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
ERCC3_RAD25_C
TAF1D
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
138137628
NCBI-ProteinID:
XP_068913230
LinkDB
All DBs
Position
9:complement(3063367..3066037)
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AA seq
711 aa
AA seq
DB search
MSGFNYSGFQMNQKRHNAVPPPPLSGVSKQGYSTMNAISQNALSAAWGGSRKRAATEDEY
FEDDEEEAVPDLAYIPAPGSPTRVEMTKKQQPVTADDDDDPLDAYMAGIEKQMETEKPGS
SSQGGVRNDLEEEDVEESYYRYMEENPTAGLAPVEDENPDLEYDEDGNPIPPDKKKIIDP
LPPIDHSTIEYKPFEKNFYKEHPEITSLTNKQVAELRKTFDLTVSGTNPPKPVSSFAHFN
FDDKLLKAIIKAEYISPTPIQAQAVPCSIQGRDVLGIAQTGSGKTAAFLWPLLKHVSAQP
PVVEGEGPAALILAPTRELAIQIYNEAKKFARVYDLTVVCAYGGGSKWEQSLALKEGADI
VVATPGRIIDHVKGGATNLQRVTFLVLDEADRMFELGFEPQVRSVCNHVRPDRQTLLFSA
TFRKRIEKLAKDALIDPVRISQGITGQANEDVTQKVLLMENQQLKRDWLVNNLVEMLSAG
SVLVFVTKKVDAEQLAADLKVKEFDCLLLHGDIEQAERNKVITAFKKKECGLLVATDVAA
RGLDIPHIRTVVNYDIARDIDTHTHRIGRTGRAGNQGTAFTLITPRDKEFVGHIVKNLEA
AHQEVPQEVLDLALQSSWYRKQRYKSKGGNPNVGGVGLGFKEKVGSAPKGFVSGEAPTQQ
SQQSRGPATDRLSAMKAAFKTQYMNQFTASSEPTQQAHQPSASTRKKSRWQ
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgagcggttttaactactcggggttccagatgaaccaaaagaggcacaacgcggtgcct
ccgcccccgttaagcggcgtcagcaagcagggttactcgacgatgaacgccatcagtcaa
aacgcgttgtctgccgcgtggggtggcagtcgcaaacgagccgctaccgaggatgagtat
tttgaagacgacgaagaagaagcggtaccagatttagcgtacataccggcccccgggagt
ccgactcgagtggaaatgacgaaaaagcaacaaccagtgactgctgatgacgacgatgat
cctctcgacgcttacatggcggggatcgagaaacagatggaaacagagaaaccaggtagt
tcgtcgcaagggggcgtgcgtaacgatttggaagaggaggacgttgaagagtcgtattat
cgttacatggaggagaatccgactgcgggtttagcaccagttgaagacgagaatcccgat
ttggaatatgacgaagacggaaatccgattccacctgataagaaaaaaattatcgatccg
ttacccccgatcgaccactccactatagaatacaaaccgtttgaaaagaatttttacaag
gagcaccccgagattacaagtctgactaacaagcaagtcgcggagttgaggaagactttt
gatctcacagtttcggggacgaatccgccgaaaccggtctcgtcttttgctcattttaat
ttcgacgataaacttttaaaagcgataattaaagccgagtacatttcgcctaccccgatt
caagcgcaagctgtcccttgttctattcaaggtcgcgatgttttgggtattgctcagacc
ggaagcggcaaaactgccgctttcttgtggcctcttctcaaacacgtgtcggcgcagcct
cccgtggtcgaaggggagggtcccgcggcactgattttagcccccacgagagaattggcg
attcagatatacaacgaggccaagaaattcgcgagagtgtacgacctgacggtggtatgc
gcctacggtgggggctctaagtgggagcaaagcctggccttgaaggaaggagcggacatc
gtggtggcaactccggggaggataatcgatcacgtgaaagggggcgcgactaatttgcaa
cgagtcacgtttcttgtgttggacgaggccgacaggatgttcgaattggggttcgagccc
caggtcaggtccgtctgcaatcacgtcagacccgacagacagacgctgttgttcagcgcc
accttcaggaagagaatcgagaagctcgcgaaagacgcgttgatcgatccggtgaggatt
tcgcaggggatcacgggccaagccaacgaagacgtcacccagaaggtgttgctgatggag
aatcaacagttgaagagggactggttggtgaacaatctggtggagatgttgtccgcgggc
tcggtgctagtcttcgtgacaaaaaaagtggatgcggagcagctcgccgccgacctcaaa
gtgaaagaattcgactgtttgctgctgcacggcgacatcgagcaggcggagaggaacaaa
gtcataaccgcgttcaagaagaaggagtgcggtttgttggtggccacggacgtggcagct
cgaggcctggacatcccccacattcgcacagtggtgaactacgacatagccagagacatc
gacactcacacccacaggatcggtcggacggggcgcgccggcaaccagggtacagctttc
acgttgatcaccccccgagataaggagttcgtcgggcacatcgtcaagaatctggaagct
gcgcatcaagaagtgccgcaagaagtgctcgatctggcgttgcagagctcctggtaccgg
aagcagcggtacaagagtaaaggcggcaatccaaatgtgggaggcgtggggttaggtttt
aaggagaaggtggggagcgcgccgaaagggttcgtctcgggggaagccccgactcagcag
agccaacaatcgaggggaccggcaacggacaggttgtcggcgatgaaggcggcgttcaag
actcaatacatgaatcagttcacggcgagttctgagcccacgcaacaagcgcatcagccc
tcggcgtcgacgaggaagaagagcaggtggcagtga
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