Tenacibaculum mesophilum: F9Y86_00295
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Entry
F9Y86_00295 CDS
T06242
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp00260
Glycine, serine and threonine metabolism
tmp00460
Cyanoamino acid metabolism
tmp00630
Glyoxylate and dicarboxylate metabolism
tmp00670
One carbon pool by folate
tmp00680
Methane metabolism
tmp01100
Metabolic pathways
tmp01110
Biosynthesis of secondary metabolites
tmp01120
Microbial metabolism in diverse environments
tmp01200
Carbon metabolism
tmp01230
Biosynthesis of amino acids
tmp01240
Biosynthesis of cofactors
tmp04981
Folate transport and metabolism
Module
tmp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
F9Y86_00295
09102 Energy metabolism
00680 Methane metabolism
F9Y86_00295
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
F9Y86_00295
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
F9Y86_00295
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
F9Y86_00295
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
F9Y86_00295
Enzymes [BR:
tmp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
F9Y86_00295
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
WD40_Prp19
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QFS26922
LinkDB
All DBs
Position
complement(56513..57787)
Genome browser
AA seq
424 aa
AA seq
DB search
MQKDHQIFDLIQEEKERQLNGLELIASENFVSDQVMEAQGSVLTNKYAEGYPGKRYYGGC
EVVDIVEQIAIDRAKELFGAEYVNVQPHSGSQANTAVFAACLQPGDTILGFDLSHGGHLT
HGSPVNFSGKLYNPVFYGVVKETGYIDYDHLEQQAKEHKPKLIIAGASAYSRDIDFKKFR
EVADSVGAILMADISHPAGLIAKGILSDPLPHCHIVTTTTHKTLRGPRGGMIMIGKDFEN
PFGLKLKSGKLKKMSTLINSAVFPGNQGGPLEHVIAAKAVAFGEALTDEFLEYQIQVKEN
AQAMAKAFVEKGYEIISGGTDNHCMLIDLRNKKITGKAAEEALGKAEITVNKNMVPFDTE
SPFVTSGIRVGTAAVTTRGLKEEDMQVIVDLIDEALMNAENEEVLETVGEKVYDLMHNRR
LFIM
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaagatcatcaaatatttgatttaattcaagaggaaaaagaacgacaattaaat
ggtttagaattgattgcttctgaaaattttgtgagtgaccaagtaatggaagctcaagga
tcagttttaacaaataaatatgctgaaggatacccaggtaaacgttattacggagggtgt
gaagtggtagatatcgttgagcaaattgcgattgatagagctaaagaattatttggagct
gagtatgtaaatgtacagccacactctggaagtcaggcaaatactgcggtctttgcagct
tgtttacaaccaggagatactattttaggttttgacttatctcatggaggtcatttaaca
cacggttcaccagttaatttttcaggaaaattatacaatcctgtgttctacggagtggta
aaagaaactggatatatcgattatgatcatttagaacaacaagcaaaagagcacaaacct
aagttaatcattgctggagcttcagcgtattctcgtgatattgattttaaaaagtttaga
gaagttgctgatagtgttggagctattttaatggctgatatttcacatccagcaggatta
atagcaaagggtattttatctgatccactaccacactgtcatatagttactacaacaact
cataaaacattacgtggacctcgtggaggaatgattatgattggaaaagattttgaaaat
ccgttcggattaaaattaaaatcaggaaaattaaagaaaatgtctacattgattaactct
gcggtattcccaggaaaccaaggtggaccattagaacatgttattgcagcaaaagcagtt
gcttttggtgaagctttaacagatgagttcttggagtatcaaattcaagtaaaagaaaac
gcacaagcaatggccaaagcttttgtagagaaaggatatgaaattatttctggaggtaca
gacaaccattgtatgttaattgatttacgtaacaaaaagattacaggtaaagctgctgaa
gaagctttaggaaaagcagaaataactgtaaacaaaaatatggttccttttgatacagaa
tcaccatttgttacttctggtattcgtgttggtactgctgcagttactacacgtggtttg
aaagaagaagatatgcaggtaattgttgatttaatagacgaagcattaatgaatgctgag
aacgaagaagtactagaaacagtaggagagaaggtatatgatttaatgcataacagacgc
ttgtttattatgtaa
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