Entry |
|
Name |
(GenBank) DNA mismatch repair protein
|
KO |
K03573 | DNA mismatch repair protein MutH |
|
Organism |
tmp Tenacibaculum mesophilum
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:tmp00001]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
F9Y86_01085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:tmp03400]
F9Y86_01085
DNA repair and recombination proteins [BR:tmp03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Strand discrimination factor
F9Y86_01085
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
225796..227190
|
AA seq |
464 aa
MNKGYNIYSAKSIINFAKKLKAQSLRQACGSEIEKHGYKGKGNFGQILEKFYFGYEPNSD
AEPDFKEAGIELKSSPLKILKNKEYRSKERLVLNIINYLEVHKENFENSSFWKKNAHLLL
VFYLHDKDLDLLDYIIKLVDDWKYPNEDLKIIKHDWETINQKIKDGKAHELSEGDTFYLG
ACTKGSTALKSYRDQPFNKEKAKQRAYSLKQGYVNHIIANIAQEETAVYGKIIEQPEILD
VLQSIEDVVISKFQPFYGKSAEQIEQELGLELNSKAKSYFANLTNAILGLKLGQKIEEFE
KADIQVKTIRLKENNLPKEDISFPTFEYQKLIETDWEDSDFKNILESKFFFVFYQFEGDN
LILRKVKFWNMSYSDIIEAKSVWDKMKTTISKGKIVKEVTNKGIRKTYFPKKTENRISHV
RPHARNADDTYNLPVADKLTGLIEFTKHCFWLNASYVKDEIYGK |
NT seq |
1395 nt +upstreamnt +downstreamnt
atgaataaaggatacaatatatattctgcaaagtcaataataaactttgccaagaaatta
aaagcacaatctttaagacaagcttgtggttctgaaattgaaaaacacggttataaagga
aaaggaaattttggtcaaatattagagaagttttattttggttatgagccaaattcagat
gctgaacctgactttaaagaagcaggaatagagcttaaatcaagtcctttaaaaatctta
aaaaataaagaatatcgctcaaaagaaaggcttgttttaaatatcatcaactatcttgaa
gttcacaaagaaaactttgagaatagttcgttttggaaaaaaaatgctcatttgctttta
gtcttttatctgcacgacaaagatttagatttacttgactacataattaaattggttgat
gattggaagtaccctaatgaagatttgaaaattatcaaacacgattgggaaacaattaat
caaaaaataaaagacggaaaagcgcacgaattatcggaaggagatactttttatcttgga
gcttgtacaaaaggttctacagccttaaaatcctatcgtgaccaaccttttaataaagaa
aaagctaaacaaagagcctattcacttaaacagggttatgtaaatcatataattgctaat
atcgctcaagaagaaactgcggtttatggaaagataattgaacagcctgaaatccttgat
gtacttcaatcaattgaagatgttgtaatttctaagtttcaacctttttacggaaaatca
gcagaacaaattgaacaagagttaggtttagaattaaactcaaaagctaaaagctatttt
gcaaatcttactaatgctattcttggacttaaactcgggcaaaaaattgaagagtttgaa
aaagctgacattcaagtaaaaactattcgtcttaaagaaaataatttacctaaagaagat
atttcatttccaacttttgaatatcaaaaattaattgaaacagattgggaagattctgat
tttaaaaacattctggaaagtaaatttttctttgttttctatcaatttgagggagataac
ttaatattaaggaaagtaaagttttggaatatgtcatattcagatattatagaagctaaa
tctgtttgggataaaatgaaaacaaccatttcaaaaggaaaaattgtaaaagaagtaaca
aacaaaggtattcgaaagacctatttcccgaagaaaacggaaaatagaattagccacgtt
agaccacacgcaagaaatgcagacgacacttataatttaccagttgccgacaaactaaca
gggttaatcgaatttacaaaacattgtttttggttaaatgcgagttacgtaaaagatgaa
atttatgggaaataa |