Tenacibaculum mesophilum: F9Y86_01785
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Entry
F9Y86_01785 CDS
T06242
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tmp
Tenacibaculum mesophilum
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmp03400
]
F9Y86_01785
DNA repair and recombination proteins [BR:
tmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
F9Y86_01785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_16
AAA_22
AAA_10
TrwB_AAD_bind
FtsK_SpoIIIE
AAA_30
ResIII
TraG-D_C
CbiA
Zot
AAA_19
AAA_7
P-loop_TraG
Zeta_toxin
Cwf_Cwc_15
AAA_6
RF-1
Hydrolase
SRP54
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QFS27199
LinkDB
All DBs
Position
complement(388894..390414)
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AA seq
506 aa
AA seq
DB search
MSKTEEFFNYIKEGYTTKGEFITLGAGMLGEETVTNAHVNIPLKTLNRHGLIAGATGTGK
TKTLQVLAENMSEKGIPVLLMDVKGDLSGLAQPSPGHVKIDERHEKIGIPFTPTKFPIEI
LSISEQNGVRLRATVSEFGPVLLSRILDLTETQSGIVAIIFKYCDDNQLPLLDLKDFKKI
LQYITNEGKEEIKKEYGRISTASTGAILRKIVEIEQQGGDLFFGEKSFDVDDLTRIDENG
RGVISVLRLTDIQDRPKLFSTFMLQLLAEVYETFPEQGDSGRPELVIFIDEAHLVFDEAS
KALLSQIESIVKLIRSKGIGLYFVTQNPKDVPEDVLAQLGMKIQHALRAFTAKDRKAIKL
AAENYPDSEYYDTKEVLTQLGIGEALISVLNEKGIPTPLARTMLRAPMSRMDVLTDKEIK
QVLDNSRLIPKYNDTIDRESAYEMLNEKIEKVNKEKTEEARKEEEEKTRRKSSTRSRSTR
MNPIVKVLTSATFIRAAFGILKKVIK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaccgaagagtttttcaattacatcaaagaaggctatacaacaaaaggagag
tttattacgctaggagcaggaatgttaggagaagaaactgtaacaaacgctcatgtaaat
attcctttaaaaacattaaatcgtcacggattaatagctggagcaacaggaacaggaaaa
acaaaaaccttgcaagtgctggcagaaaacatgtcagaaaaaggaatacctgtattgtta
atggatgtaaaaggagacttaagtggattagcacaaccaagtcctgggcatgttaagatt
gatgaacgccacgaaaaaatcggaataccatttactccaacaaaatttccaatagaaatt
ttatctatttcagaacaaaacggagtccgtttacgtgctacagtttctgaatttggacct
gttttattatcacgtattttagatttgacggagacacaatctggaattgtagcgattatt
tttaaatattgtgatgataaccaattaccgttattagacttaaaagacttcaagaaaatc
cttcaatacataaccaatgaaggaaaagaagagattaaaaaagaatacggaagaatttct
accgcaagtactggagcaattctcagaaaaattgttgaaattgagcaacaaggaggtgat
ttattcttcggagaaaaatcatttgatgttgacgatttaactcgtattgatgaaaacgga
cgtggcgttatttctgtattacgcttgacagatattcaagatagaccaaagttgttttca
acctttatgctacagttactagctgaggtatatgaaacttttccagaacaaggagatagt
ggtcgaccagaattggtgatttttatagatgaagcccatttagtatttgatgaagcttca
aaagcgttattaagtcaaatagaaagcatcgtaaaattaattcgatctaaaggaatagga
ttatactttgtaacacaaaatccaaaagatgttccggaagacgtattagcacagttagga
atgaagattcaacatgccttacgtgcctttacagcaaaagatagaaaagcaattaaatta
gctgcagaaaactatccagattctgaatattacgatactaaagaagtattaacacagttg
ggaataggagaggcgttgatttctgtattaaatgaaaaaggaattccaacaccattggca
cgaaccatgttacgtgcacctatgagtagaatggatgtattaacagataaggaaattaaa
caagttttagataattcaagattaatcccgaaatacaacgatactattgatagggagagt
gcttacgaaatgctaaacgagaagatagaaaaagtcaacaaagaaaaaactgaagaagca
cgcaaagaggaggaagaaaaaacaagaagaaaatcttcaacacgtagtagaagcacacgt
atgaacccaatagtaaaggtattaaccagtgctacctttataagagcagcctttggaatt
ttgaaaaaagtaataaaataa
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