Tenacibaculum mesophilum: F9Y86_02335
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Entry
F9Y86_02335 CDS
T06242
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp03030
DNA replication
tmp03430
Mismatch repair
tmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F9Y86_02335
03430 Mismatch repair
F9Y86_02335
03440 Homologous recombination
F9Y86_02335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmp03032
]
F9Y86_02335
03400 DNA repair and recombination proteins [BR:
tmp03400
]
F9Y86_02335
Enzymes [BR:
tmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F9Y86_02335
DNA replication proteins [BR:
tmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F9Y86_02335
DNA repair and recombination proteins [BR:
tmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F9Y86_02335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QFS27307
LinkDB
All DBs
Position
complement(534749..535576)
Genome browser
AA seq
275 aa
AA seq
DB search
MNLNLTKPIVFFDLETTGINIAKDRVVEISILKVFPNGNKESKTWLVNPEIEIPKEASEI
HGITNEKVVAEPTFKELAPQINELIGDADLAGFNSNRFDIPLLAEELLRAGIDFNMNNRK
AVDVQTIFHKKEQRTLSAGYQFYCGKELVGAHGAEADTKATYEILLAQVEKYEDLENSVE
ALSEFSTHGKRADFAGFILFNDKDQEIFSFGKYKGRTVEEVFKENPGYNAWIQNADFPLY
TKKVLKEIKERMSAPKDTMTDEEKLQALQQKFNLR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaatttaacaaaaccaatcgtattttttgatttagaaacaacaggaataaac
atagctaaagatagagtagttgagatatctattttaaaagtgtttcctaatggaaataaa
gaaagtaaaacatggttggtaaacccagaaatagaaatacctaaagaagcttcagaaatt
cacggaattacaaacgaaaaagtagttgctgagccaacttttaaagaattagcaccgcaa
attaatgagttaataggagatgcagatttagcaggatttaactctaatcgatttgatatt
cctttattagcagaagagctgctgcgagcaggaattgattttaatatgaataatagaaaa
gcagttgatgtacaaactatttttcataaaaaagaacagagaacactaagtgctggatat
caattttattgtggaaaagagttagtaggagcgcatggagcagaagcggatacaaaggca
acctatgaaattttattagcacaggttgaaaaatatgaagatttagaaaactcagtagaa
gcattgagtgaattttcaacccacggaaaaagagcagattttgcagggtttattttattt
aatgataaagatcaagaaattttttcttttggaaagtataagggaagaactgttgaagaa
gtatttaaagaaaacccaggatacaatgcttggattcagaatgctgattttcctttgtac
acaaaaaaggttttaaaagaaataaaagaacgaatgtcggcaccgaaagatacgatgact
gatgaagaaaagttacaagccttacagcaaaaatttaatttaagataa
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