Tenacibaculum mesophilum: F9Y86_04760
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Entry
F9Y86_04760 CDS
T06242
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tmp
Tenacibaculum mesophilum
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmp03016
]
F9Y86_04760
Enzymes [BR:
tmp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
F9Y86_04760
Transfer RNA biogenesis [BR:
tmp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F9Y86_04760
Prokaryotic type
F9Y86_04760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QFS27740
LinkDB
All DBs
Position
complement(1043576..1044364)
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AA seq
262 aa
AA seq
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MNYNYSYLVRFQYLGFRLHGWQKQPNLKTVHFFVDKTLKFVCKGIRCKSVGVGRTDAKVS
STDYCFQLFIDEKLDESFFIEDFNRNSPSDIRVLAVEQLHDEEFNIIQHPKVKEYRYYFS
FGEKNHPYCAPFLTGYLDELDVELMKEGAQLFEGFHNFKHYCTKPSAETKVARSIDVCKI
EENTELSASFFPEKSFVLVIRGSGFLRNQIRLIMGALAELGKGNYDLEFIKKSLSPENSD
IDFMKTIAPASGLHLHKVEFKK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaattataactactcttatttagtacggtttcaatatttagggtttcgtttacacggt
tggcaaaaacaacctaatttaaaaacagttcatttttttgttgacaagacattaaagttt
gtgtgtaaaggaattcgttgcaagtcagtaggagttgggagaacggatgcaaaagtttca
tcgactgactattgttttcagttgtttattgatgaaaaattagacgaatctttttttatt
gaagattttaatcgcaattcaccttctgatattcgagtgttagctgtagagcaacttcac
gatgaagagtttaatatcattcagcatcctaaagtaaaagagtatcgttattatttttcc
tttggagagaaaaatcatccctactgcgctccttttttaacggggtatttagatgaatta
gatgttgaattgatgaaagaaggtgcacagttgtttgaaggttttcataattttaaacat
tattgcaccaaaccatcagcagaaaccaaagtagcgcgtagtattgatgtatgtaaaata
gaagaaaatacggaattatccgcttctttttttccggagaaaagttttgtgttggttatt
agagggagtgggtttttacggaatcaaattcgtttgattatgggagctttagctgaatta
ggaaaaggaaattatgatttagagttcatcaaaaaaagtttgagtcctgaaaatagtgat
atagactttatgaaaaccatcgcaccagcttctggactacatttacataaagtagaattt
aaaaaataa
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