Tenacibaculum mesophilum: F9Y86_04995
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Entry
F9Y86_04995 CDS
T06242
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F9Y86_04995 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tmp01007
]
F9Y86_04995 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmp03016
]
F9Y86_04995 (lysS)
Enzymes [BR:
tmp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
F9Y86_04995 (lysS)
Amino acid related enzymes [BR:
tmp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
F9Y86_04995 (lysS)
Transfer RNA biogenesis [BR:
tmp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
F9Y86_04995 (lysS)
Prokaryotic type
Other AARSs
F9Y86_04995 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
AlkZ-rel
SSB
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QFS27773
LinkDB
All DBs
Position
1098842..1100539
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AA seq
565 aa
AA seq
DB search
MQLSEQEVVRREKLSKLRELGINPYPADLFPFNSNSKQIKQEFKEGKKVVIAGRLMSRRI
QGKASFAELQDSEGRIQVYFNRDEICTGEDKTLYNEVYKKLLDIGDFVGIEGELFKTQVG
EITVMVKDFKLLSKSLKPLPLPKVDAEGNTFDGFTDPEMRYRQRYADLVVNPQVKEVFVK
RTKLFNAMRQFFNDAGYFEVETPILQPIPGGAAARPFITHHNALDIPLYMRIANELYLKR
LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMEFTEKLLEHCALAVN
GTTEATFGEHKVDFKAPYARVTMADSIKHFTGFDINGKSEDEIRKAAQDMGIEVDDTMGK
GKLIDEIFGEKCEGNYIQPTFITDYPKEMSPLCKEHRDNPELTERFELMVCGKEIANAYS
ELNDPIDQRERFEAQLKLAARGDDEAGEFIDQDFLRALEYGMPPTSGLGIGMDRLIMYLT
NNPSIQEVLFFPQMKPEKKAPTVELNDDEKAVLALLEKAEKIDLNDLKSQSGLSNKKWDK
TIKGLTKNSLAKVEKTAEGLFVEIV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcaattatcagaacaagaagttgtacgtagagaaaaactatcaaaattacgtgaactg
ggtatcaatccatatccagcagatttatttccattcaattcaaattccaaacagattaaa
caggagtttaaggaaggtaagaaggtagttattgctggtaggttaatgtctcgtcgtatt
caaggaaaagcttcttttgctgaattgcaagatagtgaaggacgtattcaagtatacttt
aacagagatgaaatttgtactggtgaggacaaaactttgtacaacgaagtatacaaaaag
ttattagatattggtgattttgtaggtattgaaggagagttgtttaaaactcaagttgga
gaaatcaccgtgatggtaaaagattttaaattattaagtaagtctttaaagccattacca
ttacctaaagtagacgctgaaggaaatacctttgatggttttactgatcctgagatgcgt
taccgtcaacgttatgctgatttagtggtaaacccacaagtaaaagaagtattcgtaaaa
cgtacaaagttattcaatgccatgcgtcagttttttaatgatgctggttattttgaagta
gaaacacctattttacaaccaatccctggtggggctgctgcaagaccatttattacacat
cacaacgcattagacattccgttgtacatgcgtattgcaaatgagttatacttaaagcgt
ttgattgttggtggttttgacggtgtgtatgagttttctaaaaacttccgtaatgaagga
atggacagaactcacaacccagaatttacggcaatggaaatttatgtagcttacaaagac
tacaactggatgatggagttcaccgaaaaattattagagcactgtgctttagctgtaaac
ggaactacggaagctacttttggagagcataaggtagattttaaagctccgtatgcacgt
gttacgatggcagattctatcaaacactttactggttttgacatcaacggaaaatcggaa
gatgaaattcgtaaagctgctcaagacatgggtatcgaggtagatgacaccatgggtaaa
ggaaaattaattgatgagatttttggtgaaaaatgtgaaggaaactacattcaaccaaca
tttattaccgattatccaaaagaaatgtctccattgtgtaaagaacaccgtgacaatcct
gaattaaccgagcgttttgagttaatggtatgtggtaaagaaattgccaatgcatactct
gaattaaacgaccctatcgatcaacgtgaacgttttgaagctcagttaaagttagctgcg
cgtggtgatgatgaagctggtgaatttatcgatcaagacttcttacgtgcgttagaatat
ggtatgcctcctacttctggattaggaattggaatggaccgtttaattatgtatttaacg
aacaatccttcaattcaagaagtgttattcttcccacaaatgaaacctgagaagaaagct
cctacagttgaattaaacgacgatgaaaaagctgtattagctttattagaaaaagctgaa
aaaatagatttaaatgatttaaaatctcaaagtggtttgtctaataaaaagtgggacaaa
actattaaaggactaactaaaaacagtcttgctaaagttgaaaaaacagccgaaggtttg
tttgtagaaatcgtatag
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