Tenacibaculum mesophilum: F9Y86_06305
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Entry
F9Y86_06305 CDS
T06242
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F9Y86_06305 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmp03400
]
F9Y86_06305 (ruvB)
Enzymes [BR:
tmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F9Y86_06305 (ruvB)
DNA repair and recombination proteins [BR:
tmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F9Y86_06305 (ruvB)
RecFOR pathway proteins
F9Y86_06305 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_22
AAA_5
Mg_chelatase
AAA_3
TIP49
nSTAND3
ResIII
AAA_14
AAA_16
AAA_33
TsaE
AAA_18
Rad17
RNA_helicase
AAA_28
NB-ARC
AAA_PrkA
AAA_24
Bac_DnaA
NTPase_1
DUF815
AAA_17
NACHT
NPHP3_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QFS28022
LinkDB
All DBs
Position
complement(1424249..1425271)
Genome browser
AA seq
340 aa
AA seq
DB search
MNENLNPENTNYSNEELDVEKKLRPLSFDDFTGQDQAIDNLKVFVEAANQRDEALDHALF
HGPPGLGKTTLAHILANELGVGIKVTSGPVLDKPGDLAGLLTNLDERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQINLEPFTLVGATTRSGLLTAPMRARFGISSR
LHYYSTELLTTIIQRSAFILKVPISMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGNG
TITIEIAKYALKALNVDAHGLDEMDNKILSTIIDKFKGGPVGITTLATAVAENSETIEEV
YEPFLIQQGFIMRTPRGREVTDLAYKHLGRIKGTSQGELF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaacttaaaccctgaaaacacaaattattcaaatgaagaattagatgtagaa
aaaaaactgcgtccgctttcatttgatgattttactggccaagatcaggcaatagataat
ttaaaggtttttgtagaagcagcgaatcaacgagatgaagcgttagatcatgccttattt
cacggccctccaggattaggaaaaacaacattggctcatattttagctaatgaattagga
gttggaataaaagtaacttcagggcctgtactagataaacctggagatttggcgggttta
ctaaccaatttagatgaacgagatgttttatttatagatgaaatacatcgattaagtcca
atagttgaagaatacctgtattcagcaatggaagattataaaatcgatatcatgattgaa
tctggtccaaatgcacgtacagttcaaattaacttagagccatttactttagtaggagca
actactcgttcaggattactcacagcgcctatgcgagctcgttttggtatcagtagccga
ttacattactactcaacagaattattaacaaccatcatacaacgaagtgcatttatttta
aaagtgcctatttctatggaagcagcaattgaaattgcaggaagaagtagagggactcct
cgtattgctaatgcattactacgtagagtgcgtgattttgctcaaattaaaggaaatggt
acaattaccatagaaatagccaaatatgccttaaaagctttaaatgtagatgcacatggt
ttagatgaaatggataataaaattttatctactattattgataagtttaagggtggccca
gtaggaattactacgttagctactgctgtagcagaaaattcagaaacaatagaagaagtt
tatgaaccttttttaattcagcaagggtttattatgcgtacgccaagaggaagagaagta
actgatttggcatataaacatttaggaagaattaaaggaactagtcaaggagagctcttt
taa
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