Tenacibaculum mesophilum: F9Y86_06860
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Entry
F9Y86_06860 CDS
T06242
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F9Y86_06860 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tmp01007
]
F9Y86_06860 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmp03016
]
F9Y86_06860 (aspS)
03029 Mitochondrial biogenesis [BR:
tmp03029
]
F9Y86_06860 (aspS)
Enzymes [BR:
tmp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
F9Y86_06860 (aspS)
Amino acid related enzymes [BR:
tmp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
F9Y86_06860 (aspS)
Transfer RNA biogenesis [BR:
tmp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
F9Y86_06860 (aspS)
Prokaryotic type
Other AARSs
F9Y86_06860 (aspS)
Mitochondrial biogenesis [BR:
tmp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
F9Y86_06860 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
FR47
tRNA-synt_2b
DUF6478
Motif
Other DBs
NCBI-ProteinID:
QFS28123
LinkDB
All DBs
Position
1537376..1539130
Genome browser
AA seq
584 aa
AA seq
DB search
MYRTHTCGELRASHINTEVTLSGWVQKSRDKGFMIWVDLRDRYGITQLIFDEERTSKDLM
EKAKTLGREFVVQVTGKVIERQSKNANIPTGDVEVLVSSLEILNEAKLPPFTIEDETDGG
EDLRMKYRYLDIRRNPVKNSLVFRHKVSMEVRKYLSDKGFIDVETPYLIKSTPEGARDFL
VPSRMNAGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDVLEIFEGMTRHLLKEINGVEVDKFPRITFDEAMRKYGNDKPDIRFEMEFGELNE
VAQHKDFKVFNDAELVVGIAVPGGASYTRKEIDKLIDWVKRPQVGALGMVYVKCNEDGSF
KSSVDKFYDQEDLAKWAEATGAKAGDLICILSGNTNKVRAQLSALRMELAERLGLRKPNE
FAPLWVIDFPLLELDEETGHYHAMHHPFTSPKPGQLALLDTDPGAVKANAYDLVLNGNEI
GGGSIRIHDKETQAIMFKHLGFTEEEAKAQFGFLMDAFEYGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPATIDDEQLQELSIKLDIKG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaacgcatacttgtggtgagttaagagcatcgcacattaatactgaagttacc
ctttctggatgggtacaaaaatcacgtgataagggttttatgatttgggtagatttacgt
gaccgttacggaattacacagttaatcttcgacgaggaacgcacttctaaagacttaatg
gagaaggcaaaaactttagggcgtgagtttgtagtgcaagttactggaaaagttattgag
cgtcaatctaaaaacgcaaatattccaacaggtgatgtagaggttttagtatctagttta
gaaattttaaacgaagctaaattaccaccttttacaatagaagatgaaacagatggaggt
gaagatttacgtatgaaatatcgttatttagatattcgtcgtaacccagttaaaaacagc
ttagttttccgtcataaagtatcgatggaagttcgtaaatatttatctgacaaaggattt
attgatgtggaaactccatatttaatcaaatccactccagaaggagcacgagatttctta
gtaccttctcgtatgaatgctggtcagttttatgccttaccacaatcaccacaaactttt
aaacaattgttaatggtaggtggtatggataaatacttccaaattgtaaagtgttttaga
gatgaagatttacgtgccgaccgtcaaccagaatttacacagatagactgtgaaatggca
tttgttgagcaagaggatgtgttagaaatttttgaaggaatgacacgtcatttattaaaa
gaaattaacggagttgaagtagacaaattcccaagaattacgtttgatgaagctatgcgt
aaatacggaaatgataaaccagacatccgttttgagatggaatttggtgaattaaacgaa
gtagcgcaacacaaagattttaaagtatttaacgatgctgaattagttgtaggtattgct
gtaccaggaggcgcttcatacactcgtaaagagattgataagttaatcgattgggtaaag
cgtccgcaagtaggagctttaggaatggtgtacgtgaaatgcaacgaagatggaagtttt
aaatcatcggtagacaagttctacgaccaagaagatttagctaaatgggctgaagctaca
ggagcgaaggctggagatttaatctgtatcctttcaggaaatactaacaaagttcgcgcg
caattaagtgcgttacgtatggaactagcagaacgtttaggtttgcgtaaaccaaacgag
tttgctccgttatgggtaatcgatttcccattactagaattagatgaagaaacagggcac
taccacgcaatgcaccacccatttacttctccaaaaccaggtcagttagcattattagat
actgatccaggagctgtaaaagcaaatgcttacgatttagtgttaaacggaaacgaaatt
ggtggaggttctattagaattcatgataaagaaacacaagctatcatgtttaagcattta
ggatttaccgaagaagaggcaaaagctcagtttggattcttaatggatgcttttgaatac
ggagcaccacctcacggaggtttagctttcggtttagatcgtttggtagctattttagga
ggtcaagaaaccattcgtgattttattgctttccctaaaaacaactcaggacgcgatgta
atgattgatgctcctgcaactatagacgatgagcaattacaagaattgagcattaaacta
gatatcaaagggtag
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