Tenacibaculum mesophilum: F9Y86_07000
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Entry
F9Y86_07000 CDS
T06242
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp03030
DNA replication
tmp03410
Base excision repair
tmp03420
Nucleotide excision repair
tmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F9Y86_07000 (polA)
03410 Base excision repair
F9Y86_07000 (polA)
03420 Nucleotide excision repair
F9Y86_07000 (polA)
03440 Homologous recombination
F9Y86_07000 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmp03032
]
F9Y86_07000 (polA)
03400 DNA repair and recombination proteins [BR:
tmp03400
]
F9Y86_07000 (polA)
Enzymes [BR:
tmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F9Y86_07000 (polA)
DNA replication proteins [BR:
tmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F9Y86_07000 (polA)
DNA repair and recombination proteins [BR:
tmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F9Y86_07000 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F9Y86_07000 (polA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
RNase_H_2
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QFS28147
LinkDB
All DBs
Position
1566838..1569660
Genome browser
AA seq
940 aa
AA seq
DB search
MANQKRLFLLDAYALIFRGYYAFIKNPRINSKGLDTSAIMGFTNSLLDVIKREKPDYLAV
CFDKGGSTDRVEAFEDYKANRQETPEAIRLAVPYIEKILGAMNIPAIVKEGYEADDIIGT
LAKKAEKEGLHTYMVTPDKDFAQLVSDNIFMYRPPRMGNGYEKWGVEEVKTKFGVENPLQ
VIDFLGMMGDSVDNIPGLPGVGEKTAKKFLAAYGSMEGLFENIHELKGKMREKVEANQEL
GLLSKKLATIMLDVPVELELDKLVFEQPNVEATKEIFTELEFRRLTENFLKTFAPSEETT
AVVEKPKTTKTSAAGQFDLFAAPGGGSATKDTNINGFKTIENTNHFYQLIDTPLSRKLLL
EKLMQQNSVCFDTETTGLKALEVELIGIAFSWEAGKGYYVSFPEDQEETKVILEEFRPFF
EAVNIEKIGHNLKYDIKVLSNYNMPVKGNLFDTMIAHYLINPDMRHNMDVLAETYLNYQP
VSITELIGKKGKNQLSMRQVELPKQTEYAVEDADITYQLKEHFSKELESGNVTKLFNEVE
TPLVSVLTAMEIEGINLDTDFLKTLSKALSKDISQLEQNIYEQAGEEFNIASPKQLGPIL
FDKLKLVDKPKKTKTGQYSTAEDVLSYLAKDHQIVADILEYRQYKKLQSTYVDALPNEIN
PKTGRVHTVYAQAVAATGRLSSNNPNLQNIPIRTKRGQEVRKAFIPRNEDYVLLAADYSQ
IELRIIAALSEEETMIKAFQHGEDIHASTAAKVFNVPIEEVTREQRSNAKTVNFGIIYGV
SAFGLSNQTDLSRKEAKELIDTYYATYPKLRNYISKQVDFAREHGYVETVLHRRRYLKDI
NSRNAIVRGAAERNAVNAPIQGSAADIIKLAMINIYKRFEQENFKSKMLLQVHDELVFDA
HKDELDIIKPIIKQEMENAFKMSVPLDVEIDTGANWLEAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaaaaacgactttttttactcgacgcgtacgctttaatttttagagggtat
tatgcctttattaaaaacccacgtatcaactctaaagggttagacacctcagctattatg
gggtttaccaactctttactagatgtaataaagcgtgaaaagccagattatttagccgtt
tgtttcgacaaaggaggaagtactgaccgcgttgaagcttttgaagattataaagcaaac
cgacaagaaacacctgaagccattcgtttagctgtgccttacattgaaaaaatattagga
gccatgaacatacctgccattgtaaaagaagggtacgaagccgatgatattattggtacg
ctggctaaaaaagctgagaaagaaggactacacacctacatggtaacgcctgataaagat
tttgcccaactggtttctgataatatttttatgtaccgcccacctcgtatgggaaatgga
tatgaaaagtggggtgttgaagaagtgaaaactaagtttggtgtggaaaacccgttgcaa
gtaattgactttttgggaatgatgggggattctgttgataatatccctggattacctggt
gttggtgaaaaaacagccaagaagtttcttgctgcttatggtagtatggaaggtttgttt
gaaaacatccatgagttaaaaggaaaaatgagagaaaaggtagaagctaatcaagaatta
ggcttgctttctaaaaaactagcaaccattatgctagatgttcctgttgagttagaattg
gataaattggtttttgagcaacccaatgttgaagctaccaaagaaatttttactgaatta
gaatttcgtcgtttaacggaaaacttcttaaaaacatttgctccttctgaagaaactact
gctgtagtagaaaaacctaaaacaacaaagactagtgccgcaggtcaatttgatttattt
gcagctcctggtggtggaagtgctactaaagacacaaatattaatggctttaaaaccatt
gaaaacacgaatcatttctatcaattaatagatacacctctttcaagaaaattattgtta
gagaaattaatgcaacaaaattctgtgtgttttgatactgaaacaactggattaaaggcc
ttagaagttgagctaattggaattgctttttcatgggaagctggtaaaggctattatgtt
tcatttccggaagatcaagaagaaacaaaagttatcttagaagaatttcgtccatttttt
gaagctgtaaacattgaaaagataggccacaatttaaaatacgatatcaaagtattgtca
aattacaacatgcctgtaaaagggaatttgtttgacaccatgattgcgcattaccttatc
aatcctgatatgcgtcataatatggatgtacttgctgaaacctacttaaattatcaacca
gtttctattacagaattgattggtaaaaaaggtaaaaatcaactttcaatgcgacaagtt
gagttaccaaaacaaaccgaatatgcagttgaagatgcagacatcacctatcaattaaaa
gagcacttttctaaggagttggaaagtggcaatgttaccaagttattcaacgaagtagaa
acaccattagtttctgtattaacagctatggaaattgaaggtattaatttagatactgac
ttcttaaaaacactttcgaaagccttatctaaagacatctcacaacttgagcaaaacata
tacgaacaagccggtgaagaatttaacattgcatctccaaagcaattaggtcctatctta
tttgacaagttaaaactagttgataaacctaaaaaaactaaaacagggcagtattctaca
gcagaagatgtactttcttatttagcgaaagatcatcaaatagttgctgatattttagaa
tatcgtcagtataaaaaactacaaagcacttatgttgatgcacttcctaatgaaattaac
cctaaaactgggagagtacacacagtatacgctcaggctgtagcagctacaggacgctta
agttctaacaatccgaacttacagaacattcctatccgtacaaaacgtgggcaagaagta
cgaaaagcttttattccgagaaatgaagactatgtattgctagcggctgattacagtcaa
attgaattacgaattatcgctgctttaagtgaggaagaaaccatgattaaagcctttcaa
cacggtgaagacattcacgcttctactgctgcaaaagtatttaatgttcctattgaggaa
gtaacccgcgagcaacgtagcaatgctaaaactgtaaacttcggaattatttatggagtt
tctgccttcggattgagcaatcaaaccgatttatctcgtaaagaggcaaaagagttgatt
gacacctattatgcaacctatccgaaactacgaaattatatttctaagcaggtagatttt
gctcgtgaacacggatatgttgaaaccgttttacatcgtcgtcgttatttaaaagacatc
aattctcgtaatgctattgttcgtggtgctgcagaaagaaatgctgtgaacgctcctatt
caaggttcagctgccgacatcattaaacttgccatgattaatatttacaagcgatttgaa
caagaaaacttcaagtcgaaaatgttactacaagtacatgatgaattggtttttgatgct
cataaagatgaattagatattattaaaccgattattaaacaggaaatggaaaacgctttt
aaaatgagcgttccgttagatgttgaaatagatacaggagcaaactggttagaggcgcat
taa
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