KEGG   Tenacibaculum mesophilum: F9Y86_08045
Entry
F9Y86_08045       CDS       T06242                                 
Name
(GenBank) integration host factor subunit beta
  KO
K03530  DNA-binding protein HU-beta
Organism
tmp  Tenacibaculum mesophilum
Brite
KEGG Orthology (KO) [BR:tmp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tmp03032]
    F9Y86_08045
   03036 Chromosome and associated proteins [BR:tmp03036]
    F9Y86_08045
   03400 DNA repair and recombination proteins [BR:tmp03400]
    F9Y86_08045
DNA replication proteins [BR:tmp03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    F9Y86_08045
Chromosome and associated proteins [BR:tmp03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    F9Y86_08045
DNA repair and recombination proteins [BR:tmp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      F9Y86_08045
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-DNA_bdg Arteri_nsp7a PqqD
Other DBs
NCBI-ProteinID: QFS28342
LinkDB
Position
complement(1804300..1804590)
AA seq 96 aa
MTKADIVSKISDKSGIEKADVLATVEAFMEEVKDALENGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPSKVFTEGVKTKVAVK
NT seq 291 nt   +upstreamnt  +downstreamnt
atgacaaaagcagatatcgtatctaagatttcagataagagcggaattgaaaaagcagat
gttttagccactgttgaagcatttatggaagaggtaaaagatgcattagagaatggtgac
aatgtatatttaagaggttttggtagcttcattattaaaactagagcagaaaaaactggt
agaaacatttctaaaaatacaactatcaaaattcctgcacacaacatacctgcttttaag
ccttctaaagtatttaccgaaggggtaaaaacaaaagtagctgtaaaataa

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