Tenacibaculum mesophilum: F9Y86_09490
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Entry
F9Y86_09490 CDS
T06242
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tmp
Tenacibaculum mesophilum
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmp03016
]
F9Y86_09490 (truB)
Enzymes [BR:
tmp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
F9Y86_09490 (truB)
Transfer RNA biogenesis [BR:
tmp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
F9Y86_09490 (truB)
Prokaryotic type
F9Y86_09490 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Coilin_N
TF_AP-2
Motif
Other DBs
NCBI-ProteinID:
QFS28611
LinkDB
All DBs
Position
complement(2117041..2117724)
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AA seq
227 aa
AA seq
DB search
MTAEDYKNGQVLLIDKPLEWTSFQVVNKLRWHIRKHFNIKKIKVGHAGTLDPLATGLLII
CTGKQTKNINKYQGQVKEYTGTFVVGATTPSYDLETEINETFPTEHITEELLHKTTEQFI
GKIQQKPPIFSAIKKDGKRLYELARKGETTEIKAREVEINEFEITKIDLPNVEFRIVCSK
GTYIRSIANDYGEALNSGAHLSVLRRTKIGDFSVDNAQSVDEFINSL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagaagattacaaaaacggacaggttttactaattgataaacctttagaatgg
acttcctttcaggtagtgaataaacttcgctggcatattcgtaagcattttaatatcaaa
aaaattaaagtgggacatgctggaactcttgatcctttagctactggcttgttaattatt
tgtactggaaaacaaaccaaaaacattaacaaatatcaagggcaagtaaaagaatacaca
ggtacgtttgttgtgggtgctaccactcctagttatgatttagaaactgaaattaacgaa
acattccctacagagcatataacagaagagttactacacaaaactactgagcagtttatt
ggtaaaattcagcaaaaaccaccaattttttcagctattaaaaaagatggaaagcgttta
tatgaattagctcgaaagggtgaaactactgaaattaaggctcgcgaagtggaaatcaac
gagtttgaaatcaccaaaattgatttacctaacgtagaatttagaattgtgtgcagtaaa
ggaacttatattcgctctattgccaacgattatggggaagcgttaaattctggagcacat
ttatctgtattacgaagaaccaaaattggagatttttctgttgataacgcacaaagtgtt
gatgagtttatcaatagcctataa
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