Tenacibaculum mesophilum: F9Y86_09855
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Entry
F9Y86_09855 CDS
T06242
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tmp
Tenacibaculum mesophilum
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmp03400
]
F9Y86_09855
Enzymes [BR:
tmp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
F9Y86_09855
DNA repair and recombination proteins [BR:
tmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
F9Y86_09855
Prokaryotic type
F9Y86_09855
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF4874
DUF6115
Motif
Other DBs
NCBI-ProteinID:
QFS28679
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Position
2180941..2182227
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AA seq
428 aa
AA seq
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MEDKVSIFWFRRDLRLEDNKGLHEALQSGHKVIPLFIFDKDILENLPKNDARVTFIYQTL
QQLDKELRKHQSSLIVKKGKPLEVWRELIEEYPIQGVYTNKDYEPYAIKRDKEIADFLTS
KGIRFNAFKDQVIFEENEVLKNDGTPYTVFTPYKNKWLQNFSEKKDTQDFTIDFANFYQF
LSEFPSLAFIGFEESTIKVKPYNLSSLDSYDEVRDFPSQDKTSYLSPYLRFGLVSTRKMI
RFALKTNQTFLSELIWREFFMQILYHFPKVVTQNFKQKYDAVPWRNNEEEFKKWCEGKTG
YPMVDAGMRELNETGYMHNRVRMITAGFLCKHLLIDWRWGEAYFAEKLLDYDLSANNGNW
QWAAGTGCDAAPYFRVFNPESQLKKFDKDLQYVRKWVKDLDELTYPQPMVEHKFARERAI
NTYKKALQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaagtatctattttttggtttcgtcgagacttacgtttagaagataataaa
ggtttgcatgaagcgctacaatcaggtcataaggtaataccattatttatttttgataaa
gatattttagaaaaccttcctaaaaatgatgcgcgtgtaacgtttatttatcaaacgcta
caacaacttgataaagagttaagaaaacatcaatcatctcttatagttaaaaaaggaaaa
cctctagaagtttggagggagcttatagaagaatatccgattcagggagtttacacaaat
aaagattatgaaccttacgccattaaaagagacaaggaaatagctgactttttaacatca
aaaggaataagatttaatgcttttaaagatcaagtaatttttgaagaaaacgaagttttg
aaaaacgatggaactccatatacagttttcacaccctataaaaacaagtggttgcaaaac
ttctctgaaaaaaaagatacgcaagactttacgatagactttgctaatttttatcagttt
ttatctgaatttccatcattagctttcataggttttgaagaaagtacgattaaagtaaaa
ccatacaacctatctagtttggattcgtatgatgaggtgagagactttccctcgcaagat
aaaacctcgtatttatcaccttatttacgttttggattggttagtacacgaaaaatgatt
cgttttgcgttaaaaaccaatcaaacttttttaagtgagttaatttggcgtgagtttttt
atgcaaattttatatcatttcccgaaagtagttactcagaatttcaagcaaaagtacgat
gctgttccttggagaaataacgaagaagaatttaaaaaatggtgtgaaggtaaaactggg
taccctatggttgatgcgggcatgcgagagttaaatgaaactggatacatgcataataga
gttcgtatgattactgctgggtttttatgcaaacatttattaatagattggcgttgggga
gaagcgtactttgcagaaaagctgttggattatgacctgtcagcaaataacggaaattgg
caatgggctgcaggtacgggttgcgatgcagccccgtattttagagtgtttaacccagaa
tctcaattaaaaaagtttgataaagatttacagtatgttagaaaatgggtaaaagacctt
gatgaattaacttacccacaacctatggtagaacacaagtttgcgagagaacgagcgatc
aatacctataaaaaagcactgcaataa
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