Tenacibaculum mesophilum: F9Y86_10230
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Entry
F9Y86_10230 CDS
T06242
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
F9Y86_10230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmp03021
]
F9Y86_10230
Transcription machinery [BR:
tmp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
F9Y86_10230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
DUF3793
DUF2730
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QFS28750
LinkDB
All DBs
Position
2257012..2257875
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRESKSIEKYLQEIGKIDLITADEEVELAQKIKTGDQRALETLVNANLR
FVVSVAKQYQNQGLRLSDLINEGNIGLVKAARRFDETRGFKFISYAVWWIRQSILQALAE
QSRVVRLPLNKIGSISKINKAVSKLEQSNERMPTPEEIAKVLDMTVSDVKQSMKNSGRHI
SMDAPLKEGETSNLYDVMKASEAPKPDKDLMQESLQLEISRSLETLSPRESDIIKLFYGL
EDYRPMSLTEIGETFDLTRERVRQIKEKGLRRLKQRSRTKVLQTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttaaaaataacaaaacaagttaccaatagagaatcaaaatctattgagaag
tacttacaagaaattggtaagattgatttgattactgcagatgaagaggttgagttagct
caaaaaatcaaaacaggtgaccaaagagcattagaaactttggtaaatgctaacttacgt
tttgtagtgtcggtggcaaaacaatatcaaaatcaaggattacgcctttctgacttaatt
aatgaaggaaatataggtttggttaaagcagcaagacgttttgatgaaacgcgtggattt
aagtttatatcgtatgccgtttggtggatacgtcagtctattttacaagctttagcagaa
caatctcgtgtggttcgtttaccgttgaataaaataggaagcattagtaaaattaataaa
gcagtttctaagcttgaacaaagtaatgaacgaatgccaactccagaagaaatagctaaa
gttttagatatgactgtttcagatgtaaaacagtcaatgaaaaactctggaagacatatt
tctatggatgcacctttaaaagaaggagaaacatcaaatttatacgatgtaatgaaagct
tcagaagctcctaaaccagataaagatttaatgcaagaatctttacagttggaaattagt
agaagtttagaaacattatctccaagagaatctgatatcataaagctattttatggttta
gaagattaccgccctatgagtttaactgaaataggagaaacttttgacttaacaagggag
cgcgtacgccaaattaaagaaaaaggacttagaagactcaaacaaagatcgagaactaaa
gtgttacaaacttatttaggctag
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