Tenacibaculum mesophilum: F9Y86_10770
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Entry
F9Y86_10770 CDS
T06242
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tmp
Tenacibaculum mesophilum
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmp03032
]
F9Y86_10770 (topA)
03400 DNA repair and recombination proteins [BR:
tmp03400
]
F9Y86_10770 (topA)
Enzymes [BR:
tmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F9Y86_10770 (topA)
DNA replication proteins [BR:
tmp03032
]
Prokaryotic type
DNA Topoisomerases
F9Y86_10770 (topA)
DNA repair and recombination proteins [BR:
tmp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F9Y86_10770 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF3271
Toprim_2
NAD_binding_3
Toprim_4
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
QFS28853
LinkDB
All DBs
Position
2367486..2369972
Genome browser
AA seq
828 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFQVESSFGHIADLPSKELGVNVEGDFKPKYIVSTDK
KAVVKKLKDLAKKAETVWLASDEDREGEAIAWHLAEQLKLKNENTKRIVFNSITKNAILK
AIENPRTINYNLVDAQQARRVLDRIVGYELSPVLWRKVKPGLSAGRVQSVAVRLIVERER
EIEGFTPVASYRVDAEFVNAEGKKFKAKLAKNFSTKKEAENFLNSCLGAEFSVADLQKKP
AKKSPAPPFTTSTLQQEASRKLGFPVAKTMMVAQRLYEAGLITYMRTDSVNLSDDAKKAA
QAEVIASYGEEYSKPRNYATKSKGAQEAHEAIRPTNMENHEITGEYDQTRLYSLIWKRTL
ASQMSEAKLERTVVKIDNNKNKKQFTANGEVITFEGFLKVYLEGTDNEEEEQAGMLPKME
VNEELINELITATERYTRPPARFSEASLVKQLEELGIGRPSTYAPTISTIQRREYIEKGT
VEGKERNYTQLSLANQEVSEQILTERVGSDKGKLVPTDIGNIVNDFLVENFDAILDYGFT
AKVENEFDEIADGKEDWIAMIKDFYKNFHVVVEDVAANAEKAKGERLLGVDPESGKNVYV
RLGRYGAMVQIGEATDEEKPRFASLQGDQTMNSITYEEAMDLFKLPKTLGDYEEKEVVVA
NGRFGPYIKFDGKYVSLDKGENPMSVDMDRAIELIEAKRKADAPIGEYEGMPIQKGVGRF
GPFIKWNSIFINVNKKYDFDNLSQADLEELIEDKKRKEREKLIHNFEEVGIRVEKARWGR
FNVIKGKIKVELPKTTEIEKLTQEEAVKMIEAKTPKKKTAKKKATKKK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttagtaatagttgagtcacctgctaaggcgaaaacgatagaaaagttt
ttaggaaaggactttcaggttgaatcgagttttggacacattgcagacttaccatctaag
gagttgggagtaaatgtagaaggagatttcaaaccgaagtatatagtttctaccgataaa
aaagcggtagtaaaaaaactgaaagacttagcaaagaaagcagaaactgtttggttagca
tccgatgaagaccgcgagggagaagctatagcatggcacttagcggaacaattgaagttg
aaaaatgaaaacactaagcgtattgtttttaactctattactaaaaatgcaattttaaaa
gcaattgaaaacccacgtacaattaattataatcttgttgatgctcaacaagcaagacgt
gtgttagatagaattgtaggatatgaattatctcctgtattatggagaaaagtaaaacca
ggattgtcagcaggtagggtacaatcggttgcagtacgtttaattgtagaacgtgaaaga
gaaattgaaggttttacaccagtagcttcttatcgtgttgatgcagagtttgtaaatgca
gaaggaaaaaagtttaaagcaaaattagcaaagaacttttcaacaaaaaaagaagctgaa
aatttcttgaattcttgtttaggagcagaattttctgttgctgatttacaaaaaaaacca
gcaaaaaaatctccagcaccgccatttactacatcgacgttgcaacaggaagcatcaaga
aaattaggttttccagttgccaaaactatgatggtagcacaacgtttgtatgaagcaggg
ttaataacctacatgagaacagacagtgtaaacttatctgatgatgcaaaaaaagctgct
caagcagaagttatagcttcttatggtgaagaatatagcaagccacgtaattatgcaact
aagtctaaaggagcacaagaagcgcatgaggcaattcgtccgactaacatggagaatcat
gaaattacaggtgagtatgatcaaacaaggttgtatagcttaatttggaaacgcacatta
gcttcacaaatgagtgaagctaagctagaacgtaccgtcgtaaaaatagataacaataag
aataaaaagcagtttactgcaaatggagaggtaattacttttgaaggatttttaaaagta
tatttagaagggacagacaacgaagaggaagaacaggcaggaatgttacctaaaatggaa
gtaaatgaagaattaataaacgagttgataacagcaactgaacgttacacacgtccgcca
gcaaggttttctgaagcatccttggtaaaacaattagaagagttaggtattggtcgccct
tctacgtatgcaccaaccatttcaactattcaaagaagagagtatattgaaaaagggact
gtagaaggaaaagaaagaaattacactcaattaagtttagccaatcaagaagtgtcagag
caaattttaactgaaagagtaggttcagataaaggaaagctcgtgccaacagatatagga
aatatagtaaatgatttcttagtagaaaattttgatgcaattttagattatggttttaca
gctaaagtagaaaatgaatttgatgaaattgcagacggaaaagaagattggatagcaatg
attaaagacttttataaaaactttcatgttgttgtagaagatgttgctgcaaatgcagaa
aaagcaaaaggggaacgtttattaggtgtagatcctgaaagtggaaagaatgtgtatgtg
cgtttagggcgttacggagcaatggtgcagataggagaggcaactgatgaagagaaacct
cgttttgcaagtttacaaggtgaccaaacaatgaattcaattacctatgaagaggcaatg
gatttatttaagttgccaaaaacattgggagactatgaagagaaagaagtagttgtagct
aatggaagatttggtccttatattaaatttgatggtaaatatgtatcgttagataaagga
gaaaatccaatgtctgtagatatggatagagctattgaattgattgaagcaaaaagaaaa
gcagatgctcctattggagaatatgaaggaatgccaattcaaaagggagtagggcgtttt
ggcccttttattaaatggaactctatttttatcaacgtaaataaaaaatacgactttgat
aatttaagtcaagcagatttagaagaattaatagaagataaaaaaagaaaagagcgtgaa
aagctaatccacaattttgaagaggttggtattcgtgtagaaaaagcacgctggggacgt
tttaatgtaataaaaggaaagataaaggtagaacttccaaagacaacagagatagaaaaa
ctaacacaagaagaggctgttaaaatgattgaagcaaaaacacctaagaaaaaaacagct
aaaaagaaagcaaccaaaaaaaaataa
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