Tenacibaculum mesophilum: F9Y86_11845
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Entry
F9Y86_11845 CDS
T06242
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp00541
Biosynthesis of various nucleotide sugars
tmp01100
Metabolic pathways
tmp01250
Biosynthesis of nucleotide sugars
Module
tmp_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
F9Y86_11845 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tmp01005
]
F9Y86_11845 (kdsA)
Enzymes [BR:
tmp01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
F9Y86_11845 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
tmp01005
]
Lipid A
F9Y86_11845 (kdsA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
QFS29051
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Position
complement(2611670..2612488)
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AA seq
272 aa
AA seq
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MALTDIPNIKHTDSNNFFLLAGPCAIEGEDMAMRIAEKAITITDKLEIPYVFKGSFKKAN
RSRIDSFTGIGDEKALKILRKVSETFNVPTVTDIHEVSDAEKAAQYVDVLQIPAFLVRQT
DLVVAAAKTGKVVNLKKGQFMSPEAMQHAVKKVHDAGNKKAWITDRGTMFGYQDMIVDFR
GIPTMRQYAPTVLDVTHSLQQPNQSSGVTGGRPDMIETIARAGVVNNVDGLFIETHFDPA
NAKSDGANMLHLDYLESLLTNLVSIRKTINNL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggctttaactgatattccaaacataaaacatactgattcaaacaactttttcttactt
gctggtccttgtgccatcgaaggagaagatatggcaatgcgtattgctgaaaaggcaatt
accattactgacaaattagaaattccttatgtatttaaaggaagttttaaaaaagcgaat
cgtagtagaatagatagttttacaggaattggtgatgaaaaagcattaaaaattttacgt
aaagtttctgaaacttttaatgttcctaccgtaaccgacattcatgaagtttctgatgct
gaaaaagctgctcaatatgtagatgtattacaaattcctgctttcttagttcgtcaaacc
gatttagtagttgctgctgctaaaactggtaaagttgtgaatttgaaaaaaggacaattt
atgagtcctgaagccatgcaacatgctgtaaaaaaagttcatgatgcaggaaataaaaaa
gcgtggataactgatagaggtacgatgtttgggtaccaagatatgattgttgatttccgc
ggaattcctacgatgcgtcaatacgctcctactgtgttagatgttacccactccttgcaa
caaccaaaccaatcaagcggtgttactggtgggcgtcctgatatgattgaaaccattgct
cgtgctggtgtagtaaataatgtagatggtttatttatagaaacacattttgatcctgca
aatgcaaaaagtgatggagctaacatgttacaccttgattatttagaaagtttgttaacc
aacttggttagcattagaaaaactattaataatttatag
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