Tenacibaculum mesophilum: F9Y86_12150
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Entry
F9Y86_12150 CDS
T06242
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F9Y86_12150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmp03021
]
F9Y86_12150
03400 DNA repair and recombination proteins [BR:
tmp03400
]
F9Y86_12150
Enzymes [BR:
tmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F9Y86_12150
Transcription machinery [BR:
tmp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F9Y86_12150
DNA repair and recombination proteins [BR:
tmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F9Y86_12150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
QFS29110
LinkDB
All DBs
Position
2674849..2675841
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIESTDFSGRFEFRPLEPGFGLTVGNALRRVLLSSLEGFAITSLRID
GVDHEFSTIQGVVEDVTEIILNLKQVRFKKQIEESDRETVSIAISGQEQLTAGDLQKFIS
GFQVLNPDLVICNMDKSVTLNAEITIEKGRGFVPAEENKRAGAPLGTIFTDSIYTPIKNV
KYAVENFRVEQKTDYEKLVFDIDTDGSINPKDALTEAAKILIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKSDLMKFRNFG
KKSLTELDELVANKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaaattttcaaaagcctgataaagtaataatgattgaatctactgatttt
tcaggaagattcgaatttagacctcttgaaccaggttttggattaacagttggtaatgca
ttacgaagagtattattatcatctcttgaaggattcgctattacatcattacgtatcgac
ggagttgatcatgagttttcaactattcaaggtgttgtagaagatgtaacagaaattatc
ttaaatttaaagcaagtacgttttaagaagcagattgaggaatcagatagagaaacagtt
tctattgcaatatcaggtcaagagcaattaacagctggtgacttacaaaagttcatttca
ggttttcaagtactaaatccagatttagtaatttgtaacatggataaatcagtaacgtta
aatgctgaaattaccattgaaaaaggtagaggttttgtaccagcagaagaaaataaaagg
gctggtgcgcctttaggaacaatttttacagattctatttacactccaataaagaatgta
aaatatgctgttgaaaatttccgtgtagagcaaaagaccgattacgaaaaattagttttc
gatatcgatactgatggatctatcaatcctaaagatgccttaacagaagcagctaagatt
ttaatccaccactttatgttattctctgatgagcgtatcactttagaggcagatgaaatt
gcacaaactgaaacttatgatgaagaatcattacatatgcgtcagttattaaagacgaaa
ctagttgatatggatttatcagttcgtgctttaaattgtttaaaagctgcagaagtagat
actttaggagacttagtatcatttaacaaaagcgatttaatgaagttcagaaactttggt
aaaaaatcattaacagaattggatgagttagtggctaacaaaggtttaaatttcggaatg
gatttaagcaaatacaaattagataaagattaa
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