Tenacibaculum mesophilum: F9Y86_14075
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Entry
F9Y86_14075 CDS
T06242
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp03420
Nucleotide excision repair
tmp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F9Y86_14075
03430 Mismatch repair
F9Y86_14075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmp03400
]
F9Y86_14075
Enzymes [BR:
tmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F9Y86_14075
DNA repair and recombination proteins [BR:
tmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F9Y86_14075
MMR (mismatch excision repair)
Other MMR factors
F9Y86_14075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
ResIII
AAA_11
OB_MalK
Motif
Other DBs
NCBI-ProteinID:
QFS29471
LinkDB
All DBs
Position
3089196..3091526
Genome browser
AA seq
776 aa
AA seq
DB search
MNTYLEQLNEPQRAAVLQKDGPMIIIAGAGSGKTRVLTYKIAYLMEQGVDAFNILSLTFT
NKAAREMKDRIGKVVGYSEAKNLWMGTFHSVFARILRSEADRLGYPSNFTIYDTQDSVRL
ITAIIKEMNLDKDRYKPKQILSRISSFKNSLITVRAYFNNSDLQQADLEASRPRTGDIYK
EYVDRCFKSGAMDFDDLLLRTNELLARFPDVLAKYQDRFRYILVDEYQDTNHSQYLIVRA
LADRFQNICVVGDDSQSIYGFRGANIQNILNFQKDYPDVKTFKLEQNYRSTSNIVRAANS
VIDKNKTKLDKEIWTANDAGDSVKVMRTISDGEEGRFVAQSIWENQMNHQLTSDQFAILY
RTNAQSRAIEDALRKKDIKYKIYGGISFYQRKEIKDLLSYLRILINPNDEEALKRIINYP
ARGIGATTLDKLTIAANHYKKSMFDILKNINTVDINLNSGTKTKLQNFVNMIQRFQIEAQ
TKNAFEIADLVVKQTQLVKDLQKDGTPEGVNKVENVQELLNGIKDFITDKIETGEDASLT
SFLEDVALATDFDSDKQDEEPRVSLMTIHLSKGLEFPYVYIVGLEESLFPSAMSMNTRSE
LEEERRLFYVALTRAEKGAYLTYAQTRYRWGKLTDGEPSRFLEEIDEQYLEYLTPKVPEP
SVNRFIDASLFEDDSPKKIRFQKPIQKKRKEFLAKKEKTNMVPPKSKMKKVSEMSPKMNL
FDGEITVGNVVEHNRFGTGKVVALEGKGPNKKAEIEFSTVGKKKLLLQFAKLKVIG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacttatttagagcaacttaacgaaccacagagagcagctgttttacaaaaagac
ggcccaatgataattatagcaggagcaggatcgggtaaaacgagagtgctgacttataaa
attgcttatttaatggagcaaggagtagatgcttttaacattttatcgttaacatttacc
aacaaggctgcccgtgaaatgaaagatcgtattggtaaagtagtggggtatagcgaagct
aaaaacctttggatgggaacatttcactcagtttttgcacgtatcttacgttcagaggct
gatcgattaggctatccgtcaaacttcaccatttacgatacacaagattcagttcgattg
ataacggcgattatcaaagaaatgaatttagataaagatcgatacaagccaaaacaaatt
ttaagcagaatatcgtcttttaaaaacagcttaattacggttagagcgtattttaataac
tctgatttacaacaagccgatttagaagcaagtagaccgagaacaggtgatatctataaa
gaatatgtagatagatgttttaagtcaggagcgatggattttgacgatttactattgcgt
accaatgaattattagcgcgttttccagatgtgttggcaaaatatcaagatcgtttccga
tatattttggtagatgagtaccaagataccaaccattcgcagtatttaattgtacgtgcg
ttggcagatcgctttcagaatatttgtgtagtaggagatgattcgcaaagtatttacgga
ttccgtggagcgaatattcaaaatatcttgaacttccagaaggattacccagatgtaaaa
acattcaagttagaacaaaattaccgttcaacaagtaacatcgtacgcgctgcgaatagt
gttattgataagaataaaacgaagctagataaagaaatttggacagctaacgatgcagga
gatagtgtgaaggtaatgcgtacaatttctgatggagaagaaggacgtttcgtagctcaa
tctatttgggaaaaccaaatgaatcatcagttaacaagcgatcaatttgccattttatac
cgtaccaatgcacaatcgagagcgatagaagatgcattgcgtaaaaaagatattaagtat
aaaatttacggaggtatttcattctaccaacgtaaagaaattaaagatttactatcgtat
ttacgaattttaatcaacccgaatgatgaggaagcattaaaacgtattattaactaccca
gcaagggggattggagctacaacgttagataaactaacaattgcagcgaatcattataaa
aaatcaatgtttgatattttaaagaatatcaatacggtagacattaatcttaattcagga
accaaaacaaagttgcagaattttgtaaacatgattcaacgttttcaaattgaagcacaa
acaaaaaatgcttttgaaattgctgatttggtagttaaacaaacccaattagtcaaagat
ttacaaaaagatggaactccagaaggcgttaataaagtcgaaaatgttcaagaactttta
aacggaataaaagattttattaccgataaaattgaaacaggagaagacgcatcgttaact
tcatttttagaagatgtcgctctagccactgattttgattctgataagcaagatgaagaa
cctagagtttcgttaatgacaattcacttatccaaaggtttagagtttccttatgtgtac
attgtaggtttagaagaaagtttattcccttcagcaatgagtatgaatactcgcagtgaa
ttagaagaagaacgtcgtttgttttacgtagcgttaacaagagctgaaaaaggagcgtat
ttgacctatgcacaaacacgttatcgttggggtaaattaactgatggtgagccaagtaga
tttttagaagaaatagatgagcaatatttagagtatttaacgccaaaagtacctgaacca
tcagtaaataggtttattgatgctagtttgtttgaagacgattccccaaaaaaaatacgt
tttcaaaaaccaattcaaaagaaaagaaaagagttcttagcgaagaaagaaaaaacaaat
atggttcctccaaaaagtaaaatgaagaaggtttcagaaatgagcccaaaaatgaatttg
tttgatggagaaatcactgtaggaaacgtagtagaacataaccgttttggcactggaaaa
gtagtagctttagaaggtaaaggacccaataaaaaagcagaaatagagtttagtaccgta
ggtaaaaagaaattattgttacaatttgcaaaattgaaagtaatcgggtag
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