Tenacibaculum mesophilum: F9Y86_14600
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Entry
F9Y86_14600 CDS
T06242
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tmp
Tenacibaculum mesophilum
Pathway
tmp03030
DNA replication
tmp03430
Mismatch repair
tmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F9Y86_14600 (dnaX)
03430 Mismatch repair
F9Y86_14600 (dnaX)
03440 Homologous recombination
F9Y86_14600 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmp03032
]
F9Y86_14600 (dnaX)
03400 DNA repair and recombination proteins [BR:
tmp03400
]
F9Y86_14600 (dnaX)
Enzymes [BR:
tmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F9Y86_14600 (dnaX)
DNA replication proteins [BR:
tmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F9Y86_14600 (dnaX)
DNA repair and recombination proteins [BR:
tmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F9Y86_14600 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
RCF1-5-like_lid
AAA_14
AAA_5
DNA_pol3_delta_C
TIP49
AAA_30
Rad17
AAA_16
ResIII
DNA_pol3_gamma3
AAA_7
nSTAND3
AAA_assoc_2
AAA_24
AAA_18
Sigma54_activ_2
DUF815
Mg_chelatase
AAA_2
iSTAND
RNA_helicase
AAA_28
NPHP3_N
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
QFS29570
LinkDB
All DBs
Position
complement(3216864..3218567)
Genome browser
AA seq
567 aa
AA seq
DB search
MEHFIVSARKYRPQNFEDVVGQQAITNTLENAIQNNHLAQALLFTGPRGVGKTSCARILA
KRINQEDATTDDEDFAFNIFELDAASNNSVDDIRNLTDQVRIPPQTGKYKVYIIDEVHML
SQAAFNAFLKTLEEPPAHAIFILATTEKHKIIPTILSRCQIFDFKRIGVLDAKEYLKTIC
AKENITAEDDALHVIAQKADGAMRDALSIFDRVVSFSGNNLTREAVTKNLNVLDYDVYFN
ITDLLLQNKIPEVLMAFNDVLGKGFEGHHFINGLASHFRDLLVAKDQATIALLEVGDNTK
KKYLEQASKASMQFLLPAIDKANDCDLKYRGSKNQRLLVELTLMQIASITFDGAKKKSSN
YIIPATFFTALSPSVKKTEVKPIVTKTPKKMEPVQVTSTETKEKTPTKPVLKNIKRRTSA
LSLKSLQQKKEVKSTIDTEENFDNHPRTPFTQDELKDAWKKYYFQLQGFGERSIAAILAS
GEPKLQEDFTIVFSLPNDLMKSQLEKGKPKLLRFLREKLNNYGIQINVIVNETVEKKFAY
TPQEKYDKLKEKNPLIEKLKSTFGLDV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggaacattttatagtatcggcacgtaaatatcgtcctcaaaattttgaagatgtagta
gggcaacaagctattaccaatacgttagaaaatgctatacaaaacaaccatttagctcaa
gctttattgtttacaggacctcgtggagttggtaaaacatcgtgtgctcgtatcttggct
aaacgtattaaccaagaagatgcaactactgatgatgaagattttgcttttaatattttt
gaattagatgcggcttctaacaactcggttgatgatattcgtaatttaacagatcaagtt
cgtattccgcctcaaacaggaaagtacaaggtttatattattgatgaggttcacatgctt
tctcaagccgcttttaatgcttttttaaaaacgttagaagaaccgcctgcacatgctatt
tttattttagcaactactgaaaaacataaaattataccaacgatattatctcgttgtcaa
atttttgattttaaacgcattggtgttttagatgctaaagagtatttaaaaacgatttgt
gctaaagaaaacattactgctgaagatgatgcattacatgtaattgctcaaaaagctgac
ggtgcaatgcgtgacgccctttctatttttgatagagttgtaagcttctctggaaacaat
ttaactcgcgaagctgttactaaaaacttaaatgtgttagactacgatgtgtattttaac
attaccgatttattacttcagaataaaattccagaagtcttaatggcatttaacgatgta
ttgggaaaaggttttgagggacatcattttataaacggtttggcttctcactttagagat
ttgttagttgcaaaagaccaagctaccatagctttattagaggttggtgataatactaag
aaaaaatatttagagcaagcttctaaagccagtatgcaatttttactccctgctatagac
aaggctaatgattgcgacttgaaatatcgaggaagtaaaaaccaacgcttattggtagaa
cttactttaatgcaaattgcctctatcacttttgatggagcaaaaaaaaaatctagcaac
tacataattcctgctactttttttaccgctttatctccttctgtcaaaaaaactgaggta
aagcctattgttacaaaaactcctaaaaaaatggaaccagtacaagtaactagtactgaa
acaaaagaaaaaactcccactaaaccagttttaaagaacattaaacgacgtacttctgct
ttatctttaaaaagcttacagcaaaagaaagaagtaaaaagtactattgatacagaggaa
aacttcgataatcatccaagaactccttttactcaagatgagttaaaagatgcttggaaa
aaatattatttccaattacaaggttttggagaacgaagtatcgctgctattttagcttct
ggtgagcccaagttacaagaagattttactattgttttttcgttgcctaatgacttaatg
aagtctcaacttgaaaaaggaaaacctaagttattacgttttttacgagaaaaattaaat
aactatggtatccaaattaatgttattgtaaatgaaactgtagaaaaaaagtttgcctat
actcctcaagagaagtacgacaaactaaaagaaaaaaatccattaattgaaaaattaaag
agtacttttggcttagatgtttaa
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